Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3660 196 1e-44 seq3806 194 4e-44 seq3973 120 7e-22 >seq3660 Length=1598725 Score = 196 bits (216), Expect = 1e-44 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| || | |||||| || || | ||||||||||||||||||||||||||| || Sbjct 289738 TCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGA 289797 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||| | || || ||||| || || || || ||||| || || |||||||| ||||| Sbjct 289798 TAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGG 289857 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||||||||||||||| || || || || ||||| | || || || || || Sbjct 289858 AATGCCTTCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGAC 289917 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || |||||||| |||||||| || ||||| ||||| |||||||| Sbjct 289918 CTCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || | ||| ||||| ||||| ||||||||||| |||||||| || || | Sbjct 289976 AGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGC 290035 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| ||||||||||| || || || | |||||| ||||| || || || ||||| Sbjct 290036 CCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCC 290095 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || |||||||| || ||||| ||||| || | ||||| || ||| ||||| || || Sbjct 290096 TTGTCCTGAATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTG 290155 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| |||||||| || ||||| ||||| |||||||| Sbjct 290156 ATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || | ||| ||||| ||||||||||||||||| |||||||| || || | |||||| Sbjct 290894 AGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCT 290953 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || |||||||||||||| || || | ||||| ||||| || || ||||||||||| || Sbjct 290954 TCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCT 291013 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || || || ||||| || | || || | || || || | || || ||| Sbjct 291014 TGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTC 291073 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || ||||| ||||| ||||||||| Sbjct 291074 TTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 291106 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || | ||| ||||| ||||| ||||||||||| |||||||| || || | Sbjct 290204 AGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGC 290263 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| ||||||||||| || || || | |||||| || || || || ||||||||| Sbjct 290264 CCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCT 290323 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || ||||| || || || ||||| || | || || | || || || | ||| Sbjct 290324 TTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTG 290383 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || || || ||||| || || || ||||| Sbjct 290384 ATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| || ||||| || |||||||| || ||||| || || ||| Sbjct 290420 ATACCACCACGTAGACGAAGGACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCA 290479 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||||||||| ||||||||||| || || || | |||||| || || || Sbjct 290480 GAAAGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGT 290539 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || || || ||||| || | || || | || Sbjct 290540 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCA 290599 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||| |||||||| || || || ||||| || || || ||||| Sbjct 290600 ACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || | ||| ||||| ||||||||||||||||| |||||||| || || | |||||| Sbjct 290666 AGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCT 290725 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || |||||||||||||| || || | ||||| ||||| || || ||||||||||| || Sbjct 290726 TCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCT 290785 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || || || ||||| || | || || | || || || | || || ||| Sbjct 290786 TGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTC 290845 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| || || || ||||| Sbjct 290846 TTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 140 bits (154), Expect = 7e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || |||| ||| | || ||||| ||||||||||| || ||||| | ||| | || Sbjct 291119 CTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCCA 291178 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| || || ||||| ||||| || | | ||| |||||||| || || ||||| ||| Sbjct 291179 TCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCCTTA 291238 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| ||||||||||||||||| || | || || || || || || || || || Sbjct 291239 TCCTGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTTATG 291298 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || | ||| || || || |||||||| Sbjct 291299 GTCTTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 >seq3806 Length=402996 Score = 194 bits (214), Expect = 4e-44 Identities = 181/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | ||| || | || | ||| |||||||| ||||||||||| ||| Sbjct 2552 ATTCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCA 2493 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| ||||| || ||||||||||| || | ||| ||||| || Sbjct 2492 GAGAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 2433 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| || ||||| || ||||| |||||||| | ||| || || ||| Sbjct 2432 GGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCG 2373 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 2372 ACTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | |||||||| ||||| || || |||||||| |||||||| || || Sbjct 2306 AGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCC 2247 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 |||| ||| ||||||||||| || | | || ||||| ||||| || |||||||| || Sbjct 2246 TCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCT 2187 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| ||||| ||||| || | ||||| || ||||||||| || ||||| || Sbjct 2186 TGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATGGTT 2127 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||||||||| || ||||| Sbjct 2126 TTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || | ||| | ||||||||||| ||||| |||||||| Sbjct 3008 ATTCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCC 2949 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || ||||||||||| | |||||| ||||||||||| | | || || |||||| Sbjct 2948 GAGAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGA 2889 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || || ||||| |||||||| ||||||| || || | ||| Sbjct 2888 GGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 2829 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || ||||| ||||| ||||| || || || |||||| Sbjct 2828 ACTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | | || || || | || |||||||||||||| || || ||| Sbjct 3236 ATTCCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCA 3177 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || |||||||||||||| || || ||||| || | ||||||||| || Sbjct 3176 GAAAGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGT 3117 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| ||||| || || || || || ||||| | |||||| || ||| Sbjct 3116 GGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCA 3057 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||||| || ||||| || || ||||| || || || |||||| Sbjct 3056 ACTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 >seq3973 Length=340871 Score = 120 bits (132), Expect = 7e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 268815 AAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTA 268874 |||| |||| | || || | | | ||||| ||| || | | || || ||||| | | Sbjct 509 AAAAACTAAATTCCGATGAGAAACGCTTTATCTCTCATGTCTTAGCATTCTTTGCCGCTT 450 Query 268875 GTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTG 268934 |||||||||||||| || ||||| | ||||| ||| | ||||| || | ||||| | Sbjct 449 CCGATGGTATCGTTAATGAGAATCTGATTGAGAAATTCAGCCAAGAAGTGAAAATTCCCG 390 Query 268935 AAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACA 268994 |||| | ||||| || || || || || || ||||||||||||||||| ||||||||| Sbjct 389 AAGCACGTTGTTTCTATGGCTTTCAAATTGCCATAGAAAATATTCATTCTGAGATGTACT 330 Query 268995 GTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAA 269038 | | | || || |||||||| |||| || |||||| || Sbjct 329 CTTTGCTCATTGAAACTTATATTTCTGATCCAAAAGAAAAGTAA 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151334389805012