Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3306 107 2e-18 >seq3306 Length=2425807 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||||||||||||| | ||| | ||||| |||||||| ||| ||||||| Sbjct 1083351 TTCATGATACAGTGGTTAATCAGCTTCTTGCAAAAATTGATGGTGTCGAACAATTAAATA 1083292 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 | ||| | || | |||||||| || || ||| | |||||||| ||||| ||| ||| Sbjct 1083291 ACATTCTTGTTATTGGTATGACTAATAGAAGAGATATGATTGATGAGGCTTTGTTAAGAC 1083232 Query 164903 CTGGTCGATTAGAATTGAA 164921 |||| |||| || |||| Sbjct 1083231 CTGGCAGATTGGAGGTGAA 1083213 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/208 (72%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 164498 AATTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557 |||| || || || ||| |||||||||| || || ||||||| |||||| || || | Sbjct 1083753 AATTGGGTTGCAAGCATGTAAAAGGAATCTTGTTGTATGGACCACCTGGTACAGGAAAGA 1083694 Query 164558 CATTAATGGCTCGATGCATTGCT-CAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTT 164613 | ||||||||||| || | | ||| | |||||| | || ||| |||||||| Sbjct 1083693 CGTTAATGGCTCGGCAAATAGGTACAA--TGTTAAATGCAAGGGAACCG--AAAATTGTA 1083638 Query 164614 AATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTG 164673 |||||||| || | ||| | |||||||| || || || |||||| | |||| ||| Sbjct 1083637 AATGGTCCACAAATTTTGGATAAATATGTTGGAGAAAGCGAGGCTAATATCAGAAGATTG 1083578 Query 164674 TTTCAGGAGGCTGAAGAAGAACAAAAGA 164701 || || || ||||||||| |||||| Sbjct 1083577 TTCGCTGAAGCAGAAGAAGAAGAAAAGA 1083550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595839681392400