Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq2889 206 1e-48 >seq2889 Length=2382654 Score = 206 bits (228), Expect = 1e-48 Identities = 367/531 (69%), Gaps = 6/531 (1%) Strand=Plus/Minus Query 3617 AATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATG 3676 ||||||||| | || || || || || || |||||||||||||||||||| ||||| || Sbjct 2380691 AATGAATTGTTGTACTTCGCAGATGTGTGTGCTGGTCCAGGTGGTTTCAGCGAATACATT 2380632 Query 3677 TTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGAT 3736 |||| | |||||| ||| | |||||| | ||| | || || | |||||||| Sbjct 2380631 TTATCAAAAAAGAAGTGGCACGCCAAAGGATTTGGATTCACTTTGAAGAACGAAAATGAT 2380572 Query 3737 TTTCAACTGAACAGATTTTACGAT--AACTTTTCGGAAACTTTACACCCGTATTATGGTC 3794 ||| | || | || | | | | | | | |||||||| || |||| |||||| | Sbjct 2380571 TTTTCATTGGATGACTTCTTTGCTGGACCATGT--GAAACTTTCCATCCGTTTTATGG-C 2380515 Query 3795 CGCTTAA-CGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATT 3853 || | | |||| || | | | | |||||||| | | ||| | || | Sbjct 2380514 AGCAAAGGCAATGGAGATGTATTTGACACGCAAAATCAAAGGGAGTTTAGATCGATAGTG 2380455 Query 3854 ATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTT 3913 ||| | |||| || || ||||| |||||||| |||||| | || || || || || || Sbjct 2380454 ATGGGACATACTGATGGTAAAGGCGTACATTTCATGATGTCAGATGGAGGATTTTCAGTG 2380395 Query 3914 GAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTA 3973 || |||||||||||||| || || || |||||||| | | ||| | |||||||| ||| Sbjct 2380394 GAAGGTCAAGAAAATATACAGGAGATTTTATCGAAGCAATTATATCTATGTCAATGCTTA 2380335 Query 3974 ATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTT 4033 | || |||||||| | || ||||| |||| ||||| ||| | |||||| ||||| Sbjct 2380334 GTGGCGTTGATGATAGTGAGACCAGGTGGACATTTTGTTACAAAACTGTTCGATTTATTT 2380275 Query 4034 ACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATT 4093 ||| | ||||| | ||| | || ||| |||||||| | ||| | |||||| ||| Sbjct 2380274 ACATCATTTAGCGTTGGGCTTGTTTATCTGATGTATCATTGCTTTGAAAGTATTTCAATT 2380215 Query 4094 TTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 ||||| || || | || |||| || ||||| ||| | || ||| | ||| Sbjct 2380214 TTCAAGCCTAATACTTCCAGACCAGCTAATTCAGAACGTTACTTGATATGT 2380164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276538975413517