Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq3671 122 5e-23 seq3053 120 2e-22 seq3093 116 2e-21 >seq3671 Length=1231184 Score = 122 bits (134), Expect = 5e-23 Identities = 83/93 (89%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || |||||||||| || ||||||||||| |||||||||| ||||||||||||||||| Sbjct 1151404 AAATAATAAAAAA--AACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 1151461 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||| |||||||||||||||||||| Sbjct 1151462 GCAAGACGCTCTAACCAACTGAGCTAATGGGCC 1151494 >seq3053 Length=981742 Score = 120 bits (132), Expect = 2e-22 Identities = 79/87 (91%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| |||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct 523500 TAAAAAA--AAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAAGA 523557 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 523558 CGCTCTAACCAACTGAGCTAATGGGCC 523584 >seq3093 Length=1183124 Score = 116 bits (128), Expect = 2e-21 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct 390665 AAAAAATAAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAAGAC 390724 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 390725 GCTCTAACCAACTGAGCTAATGGGCC 390750 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261477371936764