Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3806 136 4e-27 seq3660 118 1e-21 seq3043 116 3e-21 seq3840 105 6e-18 >seq3806 Length=402996 Score = 136 bits (150), Expect = 4e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||||||||| || | ||| || || | ||| || |||||| | || ||||| Sbjct 2291 GTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCTAATTGCTTTCCA 2232 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| || | |||||||||||||||||||||||||||||| | || || || ||| Sbjct 2231 GCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTAGCTTTG 2172 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| ||| |||| || || |||| || |||||||||||||| |||||| Sbjct 2171 ACATTCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATGGTTTTTCCAGTGAGAGTT 2112 Query 94991 TTCACAAAGATCTGCATG 95008 || |||||||| |||||| Sbjct 2111 TTTACAAAGATTTGCATG 2094 Score = 129 bits (142), Expect = 5e-25 Identities = 172/237 (73%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | |||| |||| || | || |||||||| || | ||||| Sbjct 2785 TTTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTAT 2726 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || | | ||||| | ||| |||| |||||| || ||||||| |||| |||||| Sbjct 2725 AGTC--TGAAAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTG 2668 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 || |||||||| ||||||||||| | || || || || ||| | | || |||| Sbjct 2667 GTCAGGAGGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGA 2608 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| ||||||||||| || || ||||||||||| ||||| ||||| Sbjct 2607 GGCTTCAACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 2551 Score = 125 bits (138), Expect = 6e-24 Identities = 171/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | |||| ||||| || | |||||||| ||||| | ||||| Sbjct 3013 TTTGCATTCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTAT 2954 Query 94833 AATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || | ||||| | || |||| ||||| || |||| || || | |||||| Sbjct 2953 AGTCCG--AGAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTG 2896 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 || |||||||| ||||||||||| | || || || || ||| | | ||||||| Sbjct 2895 GTCAGGAGGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGA 2836 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| ||||||||||| || |||||||||||||| ||||| ||||| Sbjct 2835 GGCTTCAACTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCAT 2779 Score = 116 bits (128), Expect = 3e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | || | |||||||| | || ||||| ||||| | |||| Sbjct 2557 TTTGCATTCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTAT 2498 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | ||| || ||| || || || || || |||| || | | ||||||| Sbjct 2497 AATCAGAGAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGAT 2438 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || ||||| || |||||||| | |||||| || || || | | ||||| | Sbjct 2437 CCGGGGGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAG 2378 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| |||| || |||||||| || ||||||||||| |||||||||||||||| Sbjct 2377 CTTCGACTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCATGC 2321 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | ||||| |||| ||| | || ||||| || || | ||| | Sbjct 3241 TTTGCATTCCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGT 3182 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | ||| || ||| || || ||||| ||| | || || | | || |||| Sbjct 3181 AATCAGAAAGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGAT 3122 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || ||||| || |||||||| | ||||| ||||| ||| ||| || || | Sbjct 3121 CCGGTGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAG 3062 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || || ||||| || || ||||||||||| ||||| ||||| Sbjct 3061 CTTCAACTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3007 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | ||| || || ||||| | || ||||| ||||| | ||| ||||| Sbjct 3461 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAA 3402 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| ||||| ||||| ||| | || || | | || ||||| || ||| Sbjct 3401 AGAGTTCTGCCATCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGA 3342 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | ||||| ||||| ||| ||| || || | || || Sbjct 3341 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACT 3282 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || ||||| || || ||||||||||| ||||| ||||| Sbjct 3281 TCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3235 >seq3660 Length=1598725 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || |||||||| | ||||| ||||| ||||||||||| || || ||||||||| Sbjct 290951 TCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTG 291010 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| |||||||| ||| ||||| | || || || | ||||||| Sbjct 291011 TCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATG 291070 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || ||||| |||||||||||||| Sbjct 291071 GTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 291105 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||| ||||| |||||||||||||| | ||| ||||| | ||||| || || | Sbjct 290441 ACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCAG--AAAGTGTACGACCGTCTT 290498 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || ||||||||| | ||||| || || ||||| || || || || ||||||||||| | Sbjct 290499 CAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTT 290558 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| |||||||| | | |||||| | || || || | ||||| || | Sbjct 290559 GAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCT 290618 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || |||||||| || || || ||||| Sbjct 290619 TTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || |||||||| | ||||| ||||| ||||||||||| || || ||||||||| Sbjct 290723 TCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTG 290782 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| |||||||| ||| ||||| | || || || | ||||||| Sbjct 290783 TCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATG 290842 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || |||||||| || || || ||||| Sbjct 290843 GTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA-- 94852 ||| ||||| ||||| || |||||||| || | || || || | ||||| | Sbjct 290209 CAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAG--AAAGTGTACGCCCG 290266 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || ||||||||| | ||||| || || ||||| || || || || ||||||||| Sbjct 290267 TCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTG 290326 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| |||||||| | | |||||| | || || || | ||||| Sbjct 290327 TCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATA 290386 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || |||||||| || || || ||||| Sbjct 290387 GTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 >seq3043 Length=1629123 Score = 116 bits (128), Expect = 3e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 ||||| | ||| |||||| || |||| ||||||||||||||| ||| | ||||| Sbjct 1068043 TTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGATG 1067984 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 | || || |||||||| ||||| || || ||||| | || || |||||||| || Sbjct 1067983 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCG 1067924 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | ||| |||| | || || || | || |||||||| || || || |||||||| ||| Sbjct 1067923 ATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAG 1067864 Query 95000 ATCTGCATG 95008 ||||||||| Sbjct 1067863 ATCTGCATG 1067855 >seq3840 Length=147269 Score = 105 bits (116), Expect = 6e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| ||| |||| ||| ||||| ||||||||||||||||| | |||||| || | Sbjct 133579 CCACCTCGCAAGCGCAGCACTAAGTGTAAAGTAGATTCCTTTTGGATGTTATAGTCCGAC 133638 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| || | || || ||| ||||||| ||||||||||||||||| ||| Sbjct 133639 AAAGTTCTGCCATCTTCTAATTGCTTACCGGCAAAGATCAATCTTTGCTGATCTGGCGGA 133698 Query 94901 ATACCT 94906 || ||| Sbjct 133699 ATTCCT 133704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448266885806040