Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4330 89.7 1e-12 >seq4330 Length=3992391 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 111360 GAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAAT 111419 |||||||| |||||||||| ||| |||||| | || ||| | | | ||| | Sbjct 1172262 GAAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTATCGGATAAAGGT 1172203 Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAG-ATTCAGTTGGTCTTGTC-G 111477 | | |||||||||| |||||| ||||| | |||||| | |||| || ||| | | Sbjct 1172202 ATTCACATTTGGGATGAAAATGGTTCACGGG-CTTTCTTGGATTCCTGTGA-CTTCACTG 1172145 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 ||| || || |||||| | ||||| || || || || || ||||| ||||||||||| | Sbjct 1172144 ACAGAGAGGAGGGTGATTTGGGACCTGTCTATGGTTTCCAGTGGCGGCACTTTGGTGCTG 1172085 Query 111538 ACTACAAAACCATGCAC 111554 | || ||| ||||||| Sbjct 1172084 AATATAAAGACATGCAC 1172068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303281142093098