Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3806 134 1e-26 seq3660 125 6e-24 >seq3806 Length=402996 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | || || ||| | |||||| | |||||||| || Sbjct 2323 ATGCAGATCTTTGTAAAAACTCTTACGGGTAAAACCATTACCCTTGAAGTCGAAGCTTCG 2382 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| || ||| |||||||| || || || || ||||| Sbjct 2383 GACACCATTGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCGGATCAG 2442 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||||| | ||||||||||| ||||||| ||||| || |||||||| Sbjct 2443 CAGCGTCTGATTTTTGCTGGCAAGCAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 2502 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||||||||| ||| |||| || || Sbjct 2503 ATTCAAAAAGAATCCACACTTCACTTGGT 2531 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | || || ||| | |||||| ||||||| || || Sbjct 3234 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACAATTACCCTCGAAGTTGAAGCTTC 3293 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || |||||||| | || || || || |||||||| || || || || ||||| Sbjct 3294 AGATACCATCGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCACCGGATCA 3353 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | ||||||| || |||||| ||||| ||||||| ||||| | ||||| || Sbjct 3354 ACAGCGTCTGATTTTCGCCGGCAAACAACTGGAAGATGGCAGAACTCTTTCTGATTACAA 3413 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||||||||| ||| | || ||||| ||| || | | ||||| Sbjct 3414 CATCCAAAAAGAATCCACACTCCACTTAGTTTTACGACTTCGCGGAGG 3461 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||||||||| | ||||||||| | |||||| | || || || || Sbjct 2095 ATGCAAATCTTTGTAAAAACTCTCACTGGAAAAACCATTACCCTTGAGGTAGAAGCTTCT 2154 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || |||||| | |||||| ||||| ||||||||||| || ||||| ||||| Sbjct 2155 GATACTATCGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAG 2214 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | | || |||||| | || |||| ||||| | || || ||| Sbjct 2215 CAACGTTTGATCTTTGCTGGAAAGCAATTAGAGGATGGCAGAACTCTTTCTGACTACAAC 2274 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || || || |||||||| ||||| Sbjct 2275 ATCCAGAAGGAATCTACGCTTCAT 2298 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | || || ||| | || || | ||||| || ||| Sbjct 2778 AATGCAAATCTTCGTGAAAACTCTTACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 2837 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| ||||| |||||||||||||| ||||| || || Sbjct 2838 TGACACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCA 2897 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||||| | || || ||| | ||||| | || | || || ||||| Sbjct 2898 GCAACGTTTGATTTTTGCTGGTAAACAATTGGAAGACGGTAGGACACTCTCGGACTATAA 2957 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||||||||||||| ||||||| || Sbjct 2958 CATTCAAAAAGAATCTACCCTTCATTTGGT 2987 >seq3660 Length=1598725 Score = 125 bits (138), Expect = 6e-24 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | ||||| ||| | ||||| | || |||||||| Sbjct 289965 ATGCAGATTTTTGTCAAAACTCTCACTGGTAAAACTATTACGCTGGAGGTCGAGGCTTCA 289906 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || ||| || ||||||||||| |||||||||||| Sbjct 289905 GACACGATCGAAAACGTGAAGGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAA 289846 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAACGTCAGC-GATTATA 24168 || |||||||||| || |||||||| || || ||| ||| | || | | | || |||| Sbjct 289845 CAAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGG--ACTTTATCAGACTATA 289788 Query 24169 ACATTCAAAAAGAATCTACAATTCA 24193 | ||||| |||||||||||| |||| Sbjct 289787 ATATTCAGAAAGAATCTACACTTCA 289763 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| | || ||||| | || || | ||||| ||||| Sbjct 291106 AATGCAGATCTTTGTCAAAACCCTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTC 291047 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| |||||| | ||||| || ||| ||||||||||| || || || ||||| Sbjct 291046 AGACACGATCGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCCCCAGATCA 290987 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| |||| | || || || ||||| ||||| | | | | | || || || Sbjct 290986 GCAGAGATTGATCTTCGCTGGAAAACAACTTGAAGACGGCCGTACGCTTTCTGACTACAA 290927 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| |||||||| ||| | ||||| || Sbjct 290926 TATTCAGAAAGAATCCACATTGCATTTGGT 290897 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | || ||||| | || || | ||||| ||||| Sbjct 290877 ATGCAAATTTTCGTCAAAACTCTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 290818 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | ||||| || ||| ||||||||||| || || || ||||| Sbjct 290817 GACACGATCGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCCCCAGATCAG 290758 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | || || || ||||| ||||| | | | | | || || || Sbjct 290757 CAGAGATTGATCTTCGCTGGAAAACAACTTGAAGACGGCCGTACGCTTTCTGACTACAAT 290698 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| |||||||| ||| | ||||| || Sbjct 290697 ATTCAGAAAGAATCCACATTGCATTTGGT 290669 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | || ||||| | || || | ||||| ||||| Sbjct 290649 ATGCAAATTTTCGTCAAAACTCTGACAGGAAAGACTATCACATTGGAAGTTGAGGCGTCA 290590 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | ||||| || ||| ||||||||||| || || || || || Sbjct 290589 GACACTATTGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCACCGGACCAG 290530 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | || ||| || ||||| ||||| | | | | ||||| ||| Sbjct 290529 CAGAGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGTCGTACACTTTCTGATTACAAC 290470 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| |||||||| Sbjct 290469 ATTCAAAAGGAATCTAC 290453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429913264312545