Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3806 107 2e-18 seq3840 91.5 1e-13 seq3660 89.7 4e-13 >seq3806 Length=402996 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| || ||||| |||||||||||| | ||| || | Sbjct 2323 ATGCAGATCTTTGTAAAAACTCTTACGGGTAAAACCATTACCCTTGAAGTCGAAGCTTCG 2382 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| |||||| || ||||| || | ||| |||||| Sbjct 2383 GACACCATTGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCGGATCAG 2442 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || |||| ||| ||||| ||| | ||||||| || ||| | | |||||||| Sbjct 2443 CAGCGTCTGATTTTTGCTGGCAAGCAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 2502 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| || || | || |||| | | | |||||||||| Sbjct 2503 ATTCAAAAAGAATCCACACTTCACTTGGTTCTTCGTCTTCGAGGAGGAA 2551 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || || ||||| || || || |||||||| || | ||| || || Sbjct 2778 AATGCAAATCTTCGTGAAAACTCTTACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 2837 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | |||||| || || || ||||||||| | || ||| || Sbjct 2838 TGACACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCA 2897 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | |||| ||| || |||||||| ||||| | | || | | || ||||| Sbjct 2898 GCAACGTTTGATTTTTGCTGGTAAACAATTGGAAGACGGTAGGACACTCTCGGACTATAA 2957 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||||||||| ||||| | ||| |||| || | | |||||||||| Sbjct 2958 CATTCAAAAAGAATCTACCCTTCATTTGGTTCTGCGTCTTCGAGGAGGAA 3007 >seq3840 Length=147269 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 |||||||||||| | || | ||| || || ||||||||||||| || ||| || | || Sbjct 133691 GATCAGCAAAGATTGATCTTTGCCGGTAAGCAATTAGAAGATGGCAGAACTTTGTCGGAC 133632 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| ||||| || |||||| |||| | ||| || | |||||||| || Sbjct 133631 TATAACATCCAAAAGGAATCTACTTTACACTTAGTGCTGCGCTTGCGAGGTGG 133579 >seq3660 Length=1598725 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| ||||| || ||||| ||||| | || ||| | Sbjct 289965 ATGCAGATTTTTGTCAAAACTCTCACTGGTAAAACTATTACGCTGGAGGTCGAGGCTTCA 289906 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || || |||||| |||||||||||| | || ||||| Sbjct 289905 GACACGATCGAAAACGTGAAGGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAA 289846 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| |||| |||||||| || |||| |||| || | | || ||||| Sbjct 289845 CAAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCAGACTATAAT 289786 Query 115466 ATTCAAAAAGAGTCTAC 115482 ||||| ||||| ||||| Sbjct 289785 ATTCAGAAAGAATCTAC 289769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425321507144680