Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3806 95.1 1e-14 >seq3806 Length=402996 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| || || || || ||||| ||||| ||||| | Sbjct 3005 CCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAG 2946 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| ||||||||||| || ||| |||| | || || ||||| ||| Sbjct 2945 AGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGA 2886 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| || || ||| || || | | | ||||| || || Sbjct 2885 ATGCCTTCTTTGTCTTGGATCTTAGCT--TTTACGTTTTCTATTGTGTCAGAGGCTTCAA 2828 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| | ||||||||||| ||||| || ||||| || || || |||||| Sbjct 2827 CTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| || || ||||| || ||||| || || || || | Sbjct 2549 CCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 2490 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || || | ||| ||||| ||| |||| || ||||| || ||| || Sbjct 2489 AGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 2430 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| ||||| ||| ||||| | | | ||||| | ||| || Sbjct 2429 ATTCCCTCTTTGTCTTGAATTTTGGCT--TTCACATTTTCAATGGTGTC-CGAAGCTTCG 2373 Query 16887 -TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||| |||||||| || || || ||||| ||||| |||||||| Sbjct 2372 ACTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405066578313610