Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq4330 82.4 7e-11 >seq4330 Length=3992391 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/162 (72%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 |||||||||||||| | ||| ||||| | | ||||| || |||||||| || ||| Sbjct 1171681 CCAGTAACATGAGCGATCATGTAAGTCAGCAAAGAATATGACGCTATGTTAAACGGCACT 1171740 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || |||||||||||| | || ||||| || || ||| | || |||| | ||| Sbjct 1171741 CCTAAACCCATGTCTGCGCTTCTTTGATAAAGTTGCGTGGACAATTCTCCGTTATTTACG 1171800 Query 20360 TAAAATTGACATAACAA---GTGACAGGGCGGAAGCGCCATC 20398 |||||||| || ||| |||||| ||||| | |||||| Sbjct 1171801 TAAAATTG---TACCAAAGTGTGACACGGCGGCAATGCCATC 1171839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441348861042760