Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3806 114 1e-20 >seq3806 Length=402996 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||| || |||| ||||| ||||||||| || ||||||||||||||||| | Sbjct 3233 CCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAA 3174 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | ||| |||||||| || ||||| ||||| |||||| || Sbjct 3173 AGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGA 3114 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080 | | |||||||||| ||||| ||| | | | |||| | || ||| | Sbjct 3113 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACT 3054 Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 |||| || |||||||| ||||| || |||||||| |||||||||||| Sbjct 3053 TCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 33937 TCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAAT 33996 || || || ||||||||||| | | || | || |||| ||| |||||||| || Sbjct 3425 TCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCATCTTCCAGTTGTTTGCCGGCGAAA 3366 Query 33997 ATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAA 34056 ||||| ||||| |||||| || | | |||||||||| ||||| ||| | | Sbjct 3365 ATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTT 3306 Query 34057 CTCACACTATCAGTAGATTCGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACA 34116 | |||| | || ||| ||||| || |||||||| ||||| || |||||||| Sbjct 3305 TCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACG 3246 Query 34117 AAGATTTGCATT 34128 |||||||||||| Sbjct 3245 AAGATTTGCATT 3234 Score = 84.2 bits (92), Expect = 2e-11 Identities = 165/241 (68%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | || ||||| || ||||||||||| |||||||| |||||||| || | Sbjct 2321 CCTCCACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAA 2262 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || |||||||| || ||||| |||| || |||||||| || Sbjct 2261 AGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 2202 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCAC---ACTATCAGTAGATTCG 34077 | | |||||||| || || |||| || | || | | |||||| || ||| Sbjct 2201 ATACCTTCTTTGTCTTGGATCTTA-GCTT--TGACATTCTCGATAGTATCAGAAGCTTCT 2145 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTTAATATG 34137 || | || || |||||||| || || ||||| |||||||||||||| | ||| || Sbjct 2144 ACCTCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCATGATGAATCTG 2085 Query 34138 T 34138 | Sbjct 2084 T 2084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397041402719878