Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3806 149 1e-30 seq3660 136 9e-27 >seq3806 Length=402996 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || || |||| |||| |||||| || || || || || | || || | || |||||| Sbjct 3215 ACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTTCTGCCATCTTCT 3156 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | |||||| || ||||| ||||||||||||||| ||| ||||| ||||| |||||| Sbjct 3155 AGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGG 3096 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 ||||| || ||||||||||| || | ||| | ||| |||||||| || || || || Sbjct 3095 ATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATTGTTTTA 3036 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| || ||||| || |||||| Sbjct 3035 CCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 Score = 145 bits (160), Expect = 2e-29 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | || || | || ||||| | |||||| || ||||| Sbjct 3426 TTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCATCTTCCAGTTGTTTGCCGGCGAA 3367 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||||||||||||| ||| ||||| ||||| ||||||||||| || |||||||| Sbjct 3366 AATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTT 3307 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| | ||| |||||||| || || || || ||||| ||||| || || Sbjct 3306 TTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCAC 3247 Query 288462 GAATATCTGCATT 288474 ||| || |||||| Sbjct 3246 GAAGATTTGCATT 3234 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||||| |||| ||| || ||||| |||||||| | Sbjct 2778 TCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGA 2719 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || ||||| || ||||| || || ||||||| || || || | || Sbjct 2718 AAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGG 2659 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || |||||||| || ||||| || ||||| ||||||||||| | ||| | ||| || Sbjct 2658 AATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAAC 2599 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| || || ||||| ||||| || ||||| || |||||| Sbjct 2598 TTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || | ||||| || ||||||||| || |||||||| | Sbjct 3006 TCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGA 2947 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | |||||||| |||||||| || || || |||| ||| || || | || Sbjct 2946 GAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGG 2887 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || |||||||| || ||||| || ||||| ||||||||||| | || | ||| || Sbjct 2886 AATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 2827 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| || || ||||| ||||| || ||||| || |||||| Sbjct 2826 TTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 120 bits (132), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | ||| || | |||| ||| ||||||||| |||||||| || | Sbjct 2550 TCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGA 2491 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | || ||||| | ||| || || || || ||||||||||| || ||| || Sbjct 2490 GAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTG---ATCCGG 2434 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||| ||||| || || ||||| |||||||| ||||| || | || | ||| Sbjct 2433 GGGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTC 2374 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || || || || ||||| || || || |||||||| Sbjct 2373 GACTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 >seq3660 Length=1598725 Score = 136 bits (150), Expect = 9e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 288234 GATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGAT 288293 || ||| |||| ||| || | |||| |||||| || |||| || |||||| || || Sbjct 289726 GAATCAGACATCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAAT 289785 Query 288294 ATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTG 288353 ||||||||| | | || ||||| || |||| || || || ||||| ||||| | || Sbjct 289786 ATTATAGTCTGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTG 289845 Query 288354 TTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC 288413 |||| || || |||||||||||||| |||||||| ||||||||||| || | || Sbjct 289846 TTGATCGGGAGGAATGCCTTCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTC 289905 Query 288414 GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| || || || || || ||||| ||||| || |||||||| Sbjct 289906 TGAAGCCTCGACCTCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 136 bits (150), Expect = 9e-27 Identities = 148/195 (76%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || ||||| ||||| | ||||| || |||||||| | ||||||||| ||||| Sbjct 290686 TTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAA 290745 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||| ||| |||||| ||||||||||| || || ||||| || || || Sbjct 290746 GATCAATCTCTGCTGA---TCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGAC 290802 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | || || || ||||| | |||||| ||||| || |||||||| || Sbjct 290803 ATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGAGTTTT 290862 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 290863 GACGAAAATTTGCAT 290877 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || || | || | ||| | ||| ||| || || ||||| ||||| | Sbjct 290195 CCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAA 290254 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||||||||| |||||||||| | ||| || |||| Sbjct 290255 AGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGG 290314 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||| || || ||||| || || || || || |||| || || || ||| Sbjct 290315 ATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACT 290374 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || |||||||| |||||||| || ||||| Sbjct 290375 TCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 Score = 134 bits (148), Expect = 3e-26 Identities = 148/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || ||||| ||||| | ||||| || |||||||| | ||||||||| ||||| Sbjct 290914 TTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAA 290973 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||| ||| |||||| ||||||||||| || || ||||| || || || Sbjct 290974 GATCAATCTCTGCTGA---TCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGAC 291030 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | || || || ||||| | |||||| ||||| || ||||| || || Sbjct 291031 ATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTT 291090 Query 288459 GACGAATATCTGCATT 288474 ||| || ||||||||| Sbjct 291091 GACAAAGATCTGCATT 291106 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || | ||| || || | ||| | ||| ||| || || ||||| || || | Sbjct 291106 TCCACCACGCAATCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGA 291165 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || ||||| ||||| | || ||||| || ||||||| |||||| ||| | ||| Sbjct 291166 CAAAGTACGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGG 291225 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||| ||||||||||| || ||||| || || || |||| || | || || Sbjct 291226 GATACCTTCCTTATCCTGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAAC 291285 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || |||||||| |||| ||||| ||||| |||||||| Sbjct 291286 TTCAAGAGTTATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||| | || ||| ||||| || || || || | Sbjct 290423 CCACCACGTAGACGAAGGACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCAGAA 290482 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||||||||| |||||||||| | ||| || |||| Sbjct 290483 AGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGG 290542 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||| || || ||||| || || || || || |||| || || || ||| Sbjct 290543 ATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACT 290602 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || |||||||| |||||||| || ||||| Sbjct 290603 TCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179588818956842