Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3806 152 2e-31 seq3431 136 2e-26 seq3660 134 5e-26 seq3743 125 3e-23 >seq3806 Length=402996 Score = 152 bits (168), Expect = 2e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| || || |||||||| ||||| ||||| || ||| | || Sbjct 2323 ATGCAGATCTTTGTAAAAACTCTTACGGGTAAAACCATTACCCTTGAAGTCGAAGCTTCG 2382 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | | ||| ||||||||||| || || |||||||| || ||||| Sbjct 2383 GACACCATTGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCGGATCAG 2442 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | ||||| | || || |||||||||||||| |||||| | | ||||||||| Sbjct 2443 CAGCGTCTGATTTTTGCTGGCAAGCAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 2502 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | || || | ||||||||||| || Sbjct 2503 ATTCAAAAAGAATCCACACTTCACTTGGT 2531 Score = 127 bits (140), Expect = 8e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| || || |||||||| || |||||||| |||||| | || Sbjct 2778 AATGCAAATCTTCGTGAAAACTCTTACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 2837 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || ||| | ||| || || ||||| || ||||| ||||||||||| || Sbjct 2838 TGACACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCA 2897 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| ||||| | || |||||| | ||||| || || || | |||| ||||| Sbjct 2898 GCAACGTTTGATTTTTGCTGGTAAACAATTGGAAGACGGTAGGACACTCTCGGACTATAA 2957 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | || || | || ||||| || || Sbjct 2958 CATTCAAAAAGAATCTACCCTTCATTTGGT 2987 Score = 116 bits (128), Expect = 1e-20 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| || || |||||||| || |||||||| |||||| | || Sbjct 2550 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 2609 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || ||| | ||| || || ||||| || ||||| ||||||||||| || Sbjct 2610 TGATACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCA 2669 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||| || || || | || ||||| | |||||||| || || | | || ||||| Sbjct 2670 GCAACGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGGACACTTTCAGACTATAA 2729 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | ||||| | || ||||| Sbjct 2730 CATCCAGAAGGAATCCACGCTTCA 2753 >seq3431 Length=3392949 Score = 136 bits (150), Expect = 2e-26 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || |||| |||||||| ||||| || | | || | | || |||| | |||| Sbjct 1375209 GTACTTATGAAAATGAAGGAAACTGCTGCAGCTTACTTAAATACTTCAGTAAAAAATGCT 1375150 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || |||||||| || || ||||| |||||| | ||||| |||||||| || ||||| || Sbjct 1375149 GTTATTACTGTACCAGCGTATTTTAATGATTCTCAACGACAAGCAACAAAGGATGCTGGT 1375090 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || |||||||| || ||||||||||| | ||||||||||| || |||||||| || || Sbjct 1375089 CAGATTGCTGGATTGAATGTTCTTCGTGTAATTAATGAACCAACCGCAGCTGCACTTGCT 1375030 Query 451445 TATGGACTAGGAAAATCAA-AAGA 451467 |||||| | ||| || ||| |||| Sbjct 1375029 TATGGAAT-GGATAAACAAGAAGA 1375007 >seq3660 Length=1598725 Score = 134 bits (148), Expect = 5e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || ||||||||||||||||| || || || || | || Sbjct 289965 ATGCAGATTTTTGTCAAAACTCTCACTGGTAAAACTATTACGCTGGAGGTCGAGGCTTCA 289906 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | || |||||||| ||||| ||||| |||||||| |||||| Sbjct 289905 GACACGATCGAAAACGTGAAGGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAA 289846 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | |||||| | || || || || || |||||| | ||||| | || |||||| Sbjct 289845 CAAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCAGACTATAAT 289786 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | ||||||||| | ||| | |||| ||||| Sbjct 289785 ATTCAGAAAGAATCTACACTTCACCTTGTACTTCGACTTAGAGG 289742 Score = 134 bits (148), Expect = 5e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || ||| |||| || || || || |||||||| ||||| | ||| Sbjct 291333 ATGCAGATTTTCGTGAAGACATTGACGGGGAAGACCATAACTCTTGAAGTTGAGGCTTCT 291274 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| ||| || || ||||||||||| || || |||||||| Sbjct 291273 GACACTATTGAGAATGTAAAAGCAAAGATCCAGGATAAGGAAGGTATCCCACCTGATCAG 291214 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || || | || || || || ||||||||| | |||||| | ||||| ||| Sbjct 291213 CAGCGTTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGACGTACTTTGTCTGATTACAAT 291154 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || || || ||||| Sbjct 291153 ATTCAGAAGGAATCCACTCTCCATTTAGT 291125 Score = 109 bits (120), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || |||||||||||||| || || || || ||| | || Sbjct 290193 ATGCAGATTTTTGTCAAAACTCTCACTGGTAAAACTATCACGCTGGAGGTCGAAGCTTCA 290134 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| |||||||| || |||||||| || || || ||||| Sbjct 290133 GATACGATCGAGAATGTCAAAGCTAAAATTCAGGACAAGGAAGGTATCCCACCGGATCAG 290074 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || |||||||||||||| || | || | | || || ||| Sbjct 290073 CAGAGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGGCGTACACTTTCTGACTACAAT 290014 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | ||| | || || || || || || Sbjct 290013 ATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGGCT 289976 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||| || || ||||| || | || ||||| | || Sbjct 290421 ATGCAAATTTTCGTCAAAACTCTGACAGGAAAGACTATCACATTGGAAGTTGAGGCGTCA 290362 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || ||||||||||| || |||||||| || || || || Sbjct 290361 GACACTATTGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCACCGGACCAG 290302 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || |||||||||||||| || | || | | || || ||| Sbjct 290301 CAGAGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGGCGTACACTTTCTGACTACAAT 290242 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | ||| | || || || || || || Sbjct 290241 ATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGGCT 290204 Score = 93.3 bits (102), Expect = 2e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||| || || ||||| || | || ||||| | || Sbjct 290649 ATGCAAATTTTCGTCAAAACTCTGACAGGAAAGACTATCACATTGGAAGTTGAGGCGTCA 290590 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || ||||||||||| || |||||||| || || || || Sbjct 290589 GACACTATTGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCACCGGACCAG 290530 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || |||||||||||||| || | || | | ||||| || Sbjct 290529 CAGAGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGTCGTACACTTTCTGATTACAAC 290470 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 290469 ATTCAAAAGGA 290459 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||| || || || || || | || ||||| | || Sbjct 290877 ATGCAAATTTTCGTCAAAACTCTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 290818 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||||||||| || |||||||| || || ||||| Sbjct 290817 GACACGATCGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCCCCAGATCAG 290758 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || |||||||||||||| || | || | | || || ||| Sbjct 290757 CAGAGATTGATCTTCGCTGGAAAACAACTTGAAGACGGCCGTACGCTTTCTGACTACAAT 290698 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | || || | ||| | || || || Sbjct 290697 ATTCAGAAAGAATCCACATTGCATTTGGT 290669 >seq3743 Length=1230821 Score = 125 bits (138), Expect = 3e-23 Identities = 262/390 (67%), Gaps = 3/390 (1%) Strand=Plus/Minus Query 451216 TTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAA 451275 ||| || ||||| | || ||||| || ||||| | || |||||||| | || || Sbjct 196830 TTACAAGGGTGAGATGAAGACTTTCTTCCCCGAAGAGGTGTCCTCTATGGTCTTGACGAA 196771 Query 451276 AATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGT 451335 ||||| || || || || ||| | || | | || |||| || || ||||| Sbjct 196770 GATGAAGGAGACGGCGGAGGCATACTTGGGCAAAACTATAACAAATGCCGTCATCACTGT 196711 Query 451336 TCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGG 451395 || |||||||||||||| | ||| | ||||| || || ||||| || ||||||||| Sbjct 196710 GCCGGCTTATTTCAATGACTCTCAAAGACAAGCGACAAAGGATGCCGGCGCTATTGCTGG 196651 Query 451396 TTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGG 451455 || || ||||| |||| || || ||||| ||||| || || |||| ||||| || | Sbjct 196650 CTTGAACGTTCTCAGAATAATAAACGAACCCACAGCCGCCGCGATAGCGTATGGTCTCGA 196591 Query 451456 AAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCA 451515 || ||| | ||| ||||||||| || | | ||||| || ||||| || ||| Sbjct 196590 TAA---AAAGGCTGCAGGTGAAAAAAATGTTCTGATCTTTGACTTGGGTGGTGGTACTTT 196534 Query 451516 TGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGA 451575 ||| || | || | || || ||||| | || || || || | || ||| || Sbjct 196533 TGACGTGTCGATTCTGACGATCGAGGATGGTATCTTCGAGGTGAAATCCACGGCTGGCGA 196474 Query 451576 TACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||||| || || || ||| |||| || Sbjct 196473 CACGCATCTTGGTGGCGAGGATTTTGACAA 196444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975608563022612