Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3743 233 1e-55 seq3105 178 1e-38 seq3431 113 3e-19 >seq3743 Length=1230821 Score = 233 bits (258), Expect = 1e-55 Identities = 785/1206 (65%), Gaps = 16/1206 (1%) Strand=Plus/Plus Query 517275 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 517334 |||||||||| || | ||| || || ||||| ||||| || || ||||| | || || | Sbjct 195695 TACCATTGGCGTCGATATCGAAAGTAACTTCGATTTGCGGTACACCTCTAGGTGCTGGAG 195754 Query 517335 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 517394 | || || || | |||| | || || | ||||||||||| || | || || | Sbjct 195755 GAATACCCGTCAGCTCAAATTTGCCAAGGATGTTATTATCTTTCGTCATCGCTCTCTCTC 195814 Query 517395 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 517454 ||||| | | || || || | | |||||| || || || || || || ||||| Sbjct 195815 CCTCGTAGACCTGAATGAGCACGCCCGGTTGATTGTCGGAGTATGTGGTGAACG-TCTGG 195873 Query 517455 ATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 | | || | || || || ||||| || | || | ||||||||| || || || Sbjct 195874 GTCTGTTTCGTTGGTATCGTCGTGTTCCTCTTGATCAAGGTGGTCATAACGCCGCCAGCG 195933 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 || || | ||| | || | ||||| || || | || | | || ||| | || |||| Sbjct 195934 GTCTCAATACCCAATGATAATGGAGTAACGTCCAACAGAAGTAGATCTTGGACTTCTTCA 195993 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 | | || ||||| || || |||| || |||||||| |||||||| || || Sbjct 195994 GACTTGTCGCCGTGCAGAATGGCCGCCTGAACTGCTGCACCATAAGCAACAGCCTCGTCC 196053 Query 517634 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 517693 ||||||| | || ||| |||| || ||||| || |||| | ||| |||| ||| | Sbjct 196054 GGATTAATGGATTTATTCAGTTCCTTGCCATTAAAGAAATCTTGAAGTAGTT-TCTGAAT 196112 Query 517694 TTA-GGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 517752 || || || | | || || || |||| || || || || || | |||||||| Sbjct 196113 TTTTGGTATCCTGGTGGAGCCACCGACTAGAACGATGCTGTGAACTTGAGCTTTATCCAT 196172 Query 517753 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACA 517812 || | ||| | | | || || |||||||| ||| |||||||| || | || Sbjct 196173 CTTCGCATCTCTAAGAGCCTTCTCCACGGGTTCGAGAGTGCTTCTAAACAGATCAGCGCA 196232 Query 517813 AAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAA 517870 || || ||||| | |||||||| || || | || || ||||| || || || || Sbjct 196233 GAGCTCCTCGAACCTGGCTCTAGT--GACCGATGTATAGAAGTCAATCCCCTCAAATAAT 196290 Query 517871 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 517930 ||||| | ||||| | | || ||||| || | | | || || | ||||| Sbjct 196291 GAATCGATCTCAATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCACAA 196350 Query 517931 GCTGTCCTTAGTCTTCGTAAGGCTTT-TGCTGATTGATTCAAATCTGTTTTATATTTTCT 517989 || |||||||| | || | ||| | | | | || | || |||| | || ||||| || Sbjct 196351 GCAGTCCTTAGGCGTCTCAGAGCTCTCTTGTTACTGCT-CAGATCTTTCTTGTATTTCCT 196409 Query 517990 CTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTCACCTCCCAAT 518047 ||| || |||| ||| | ||| | || | || || |||||||| || || || | Sbjct 196410 CTTAAATTCTTGCACAAA--ATGGTTCACCATTCGGTTGTCAAAATCCTCGCCACCAAGA 196467 Query 518048 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTT 518107 | || | || | ||| | | | || | ||| | ||||| || | | || || | Sbjct 196468 TGCGTGTCGCCAGCCGTGGATTTCACCTCGAAGATACCATCCTCGATCGTCAGAATCGAC 196527 Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 || ||| || |||||||||| ||||| || || ||||| |||| | ||| Sbjct 196528 ACGTCAAAAGTACCACCACCCAAGTCAAAGATCAGAACATTTTTTTCACCTGCAGCCTTT 196587 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||| ||||||||||| | || || || || ||||| || || ||||| | ||| || Sbjct 196588 TTATCGAGACCATACGCTATCGCGGCGGCTGTGGGTTCGTTTATTATTCTGAGAACGTTC 196647 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | |||||||| || ||||| || || ||||||||||| || || || ||||| || Sbjct 196648 AAGCCAGCAATAGCGCCGGCATCCTTTGTCGCTTGTCTTTGAGAGTCATTGAAATAAGCC 196707 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || ||||| || ||||||| |||| ||| || | || || ||||| | ||| Sbjct 196708 GGCACAGTGATGACGGCATTTGTTATAGTTTTGCCCAAGTATGCCTCCGCCGTCTCCTTC 196767 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTG-CTTGGATTCATTTTG 518406 || || | || | ||| || || | | ||| |||||| | | ||| ||| | Sbjct 196768 ATCTTCGTCAAGACCATAGAGGACACCTCTTC-GGGGAAGAAAGTCTTCATCTCACCCTT 196826 Query 518407 ATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTT 518466 || || |||| | | ||||||| | ||| |||| | || | || ||||||| || Sbjct 196827 GTAAGACACTTTGATCTTTGGTTTACTGCCATCATTGACCACCGTGAACGGCCAGTGCTT 196886 Query 518467 CATATC 518472 ||| || Sbjct 196887 CATGTC 196892 >seq3105 Length=3863317 Score = 178 bits (196), Expect = 1e-38 Identities = 696/1077 (65%), Gaps = 28/1077 (3%) Strand=Plus/Minus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || ||||| || |||| | ||||| || || || || ||||| | || || || || Sbjct 1684970 GTAGATTTGTCCACGGCGGAAACATTGAGGATGCCGTTCGCATCGATGTCGAACGTCACC 1684911 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTA-AATGTTCCCAG 517362 ||||| ||||| || || | | || ||||| || || | || || ||| | ||||| Sbjct 1684910 TCAATCTGAGGAACTCCACGAGGTGCTGGTGGAATACCG-CTAAGTTCGAATTTACCCAG 1684852 Query 517363 ATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGT 517422 ||||||||| || || | || ||||||||| | | || || || ||| Sbjct 1684851 TAAATTATTATCCTTGGTCATGGCGCGCTCACCCTCGTACACCTGAATCAACACGCCAGG 1684792 Query 517423 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT 517482 |||||| || | ||||||||||| | | | || || || || || ||||| Sbjct 1684791 TTGATTGTCGGCGTAAGTTGTAAAGGTTTGAGTCTGCTTCGTCGGGATGGTGGTATTTCT 1684732 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 | ||| | ||||| | |||||| || || || | ||| ||||| || |||||||| Sbjct 1684731 CTTAATGAGCGCAGTCATGACACCACCGGCAGTCTCAATACCCAGAGAGAGCGGAGTGAC 1684672 Query 517543 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAAC----AAGAATAGCTG 517598 ||| | | | | | ||| | | | || | || | || | |||| |||| | Sbjct 1684671 ATCGAGCAAAAGCAAGTCTTGCACCT---CCTCGGATTTATCACCGTGCAAGA-TAGCCG 1684616 Query 517599 CTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTT 517658 | || | || || |||||||| ||||| || |||||||| | || || || || | || Sbjct 1684615 CCTGTACTGCCGCGCCATATGCCACAGCCTCGTCAGGATTGATAGATTTGTTAAGCTCTT 1684556 Query 517659 TACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCA 517717 | ||||||||||| | ||| | || || | | ||| ||||| || | || ||||| Sbjct 1684555 TGCCATTGAAAAAGTCTTGCAGGAGCTTCT-GAATCTTGGGAATTCGCGTAGAGCCTCCG 1684497 Query 517718 ACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCA 517777 ||||| || || || || | || | ||| |||| ||| | || | |||||| Sbjct 1684496 ACTAAAACGATATCGTGGATTTGGGCTTTGTCCATTTTGGCGTCGCGCAGCGACTTTTCA 1684437 Query 517778 ACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 517837 |||||||||||| | | || | || | || ||||| ||||| ||||| || Sbjct 1684436 ACGGGTTCAAGAGTACCGCGGAAGAGATCGGCGCAGAGTTCCTCGAAACGAGCTCGGGT- 1684378 Query 517838 AGAGTGACAT-TA-TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG 517895 || || | || |||| ||||| || |||| ||||| | || || | | || | Sbjct 1684377 -GATGGAAGTGTAGAAATCGATTCCCTCATACAACGAATCGATCTCGATGCTGGCCTGGG 1684319 Query 517896 TCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG---G 517952 | || || || || | ||| || |||||||| || || || | || | || ||| | Sbjct 1684318 TGGAGGATGACAGGGTACGCTTGGCACGTTCGCAAGCCGTGCGAAGACGACG-AAGTGCG 1684260 Query 517953 CTTTTGCT-GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCAT 518011 | |||| | || | ||||||| | || ||||| | ||||| |||| || | Sbjct 1684259 CGTTTGTTCGA---AGTCAAATCCTTCTTGTATTTACGTTTGAATTCTTGCACGAAGTGA 1684203 Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071 | || | || ||||| || || || || ||||| | ||||| ||| | ||| | | Sbjct 1684202 TTGACCATGCGGTTATCGAAGTCCTCGCCACCCAAATGAGTATCTCCAGCCGTGGACTTG 1684143 Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 || | ||| | |||||||| | | || | | ||||| || |||||||| | | Sbjct 1684142 ACCTCGAAGATACCATCTTCGATGGTCAGGATGGACACATCGAAAGTGCCACCACCGAGA 1684083 Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAG 518189 ||||| ||||| || || | || ||| ||||| || ||||| || |||| | Sbjct 1684082 TCAAAGATAAGGACGTT--TCGCTCGCCGGTGGCCTTTTTGTCGAGACCGTATGCAATCG 1684025 Query 518190 CAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCAT 518249 | || || || || || || ||||| | ||| || || | || | || | || || | Sbjct 1684024 CGGCGGCGGTGGGCTCGTTGATAATACGCAATACGTTTAAGCCCGAGATGGTACCAGCGT 1683965 Query 518250 CTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 | || || || || | || || ||||| || || || || || || || || |||| Sbjct 1683964 CCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTGATCACAGCAT 1683908 Score = 86.0 bits (94), Expect = 5e-11 Identities = 168/245 (69%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| | ||| |||||||| ||||| || | ||| | || || || |||| || Sbjct 1736741 ACGCTGATCGAAATCTTCGCCTCCTAAATGAGTGTCGCCATTAGTGGCAACGACTTCAAA 1736682 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | || | |||| || | | | | || ||| ||| || || |||| ||||| | Sbjct 1736681 CACACCGTTATCAATAGTGAGCAAACTGACGTCAAAGGTGCCGCCGCCCAGGTCAAACAC 1736622 Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 ||||| || | || ||||| ||||||| | ||| || |||| ||||| ||||| Sbjct 1736621 CAGTACGTTTTTCTCGCCGTCTT---TTTTATCCAAACCGTATGCAATTGCAGCGGCAGT 1736565 Query 518200 TGGTTCATTAATAATTCTCAAAAC-ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258 || || || |||||||||| || | ||| |||| |||| |||| ||||||||||||| Sbjct 1736564 CGGCTCGTTGATAATTCTCATTACGACCAAG-CCAGAAATTGTTCCGGCATCTTTAGTGG 1736506 Query 518259 CTTGT 518263 | ||| Sbjct 1736505 CCTGT 1736501 >seq3431 Length=3392949 Score = 113 bits (124), Expect = 3e-19 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| |||| | |||||| | ||||| |||| ||||| || |||||||||||||| | Sbjct 1375003 TTTATCTTCTTGTTTATCCATTCCATAAGCAAGTGCAGCTGCGGTTGGTTCATTAATTAC 1375062 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | | |||||| | |||||||| || ||||| || || ||||||| ||| ||||| Sbjct 1375063 ACGAAGAACATTCAATCCAGCAATCTGACCAGCATCCTTTGTTGCTTGTCGTTGAGAATC 1375122 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 |||||||| || || ||||||||||| |||| ||||| Sbjct 1375123 ATTAAAATACGCTGGTACAGTAATAACAGCATTTTTTACT 1375162 Score = 107 bits (118), Expect = 1e-17 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || || ||||| || ||||| |||||||||||||||| |||||||| || || ||| Sbjct 1375025 CCATAAGCAAGTGCAGCTGCGGTTGGTTCATTAATTACACGAAGAACATTCAATCCAGCA 1375084 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || | | ||| ||| |||||||||| || | ||||||||||| |||||||||||| Sbjct 1375085 ATCTGACCAGCATCCTTTGTTGCTTGTCGTTGAGAATCATTAAAATACGCTGGTACAGTA 1375144 Query 322364 ATAACTGCTTTATT 322377 ||||| || || || Sbjct 1375145 ATAACAGCATTTTT 1375158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780607084527334