Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3306 102 9e-17 >seq3306 Length=2425807 Score = 102 bits (112), Expect = 9e-17 Identities = 171/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAA--CAACAGACA 153831 ||||| |||||| | |||||||| || ||||| |||| ||||||||| | |||| || Sbjct 421291 TTTGGAATTCCTCTTGGATATGGTGGACCTCACGCTGGATTCTTTGCGTGCCGACAG-CA 421233 Query 153832 AGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATA 153891 | || | | || ||||||||||| ||||| | |||| | | || | Sbjct 421232 ATTAGT-GCGCTTAATGCCTGGCAGAATGATAGGTGTTACGAGAGATTCTAATGGAGAGG 421174 Query 153892 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCA 153951 | || || | ||||| || || || | ||||| || ||||| ||||| ||||| |||| Sbjct 421173 ACGCTTATCGTTTAGCCCTTCAAACACGCGAGCAACACATCAGAAGAGATAAAGCCACCA 421114 Query 153952 GTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATC 154011 | || || || || || || || | || ||||||||||| | | | ||||| | ||||| Sbjct 421113 GCAATATTTGTACCGCACAAGCGTTACTCGCTAATATGTCCGCAATGTATGCGGTATATC 421054 Query 154012 ATGG 154015 |||| Sbjct 421053 ATGG 421050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579181384945760