Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3306 116 4e-21 >seq3306 Length=2425807 Score = 116 bits (128), Expect = 4e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 159541 TCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAG 159600 |||||| | ||||| || |||||||| ||| |||| ||||||||| | || || | Sbjct 420036 TCATGTTTGATGATCACGTATCCATCGACAAATGGAGTATTTGAAGAGACGATTAGTGAT 419977 Query 159601 ATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAAT 159660 ||||| || || || || | |||||||| |||||| | ||||| || ||| | ||| Sbjct 419976 ATATGCAACATGGTACACAACGCCGGTGGTCAAGTATATTTGGATGGCGCCAATATGAAT 419917 Query 159661 GCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTA 159720 || || || || | ||| |||| ||||| || || | ||||| || || Sbjct 419916 GCTCAAGTTGGCTTGTGTCGACCTGGTGATTATGGCAGTGACGTGTCACATCTCAATCTA 419857 Query 159721 CATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| || ||||| ||||| || || ||||| || ||||| | ||||||||||| || Sbjct 419856 CATAAAACGTTCTGCATTCCTCACGGGGGTGGCGGACCTGGTATGGGTCCTATTGGAGT 419798 Score = 104 bits (114), Expect = 3e-17 Identities = 175/246 (71%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 158449 TTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAA--CAACAGACA 158506 ||||| |||||| | ||||| || || ||||| |||| ||||||||| | |||| || Sbjct 421291 TTTGGAATTCCTCTTGGATATGGTGGACCTCACGCTGGATTCTTTGCGTGCCGACAG-CA 421233 Query 158507 AGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAG-CGAAGGTA-A 158564 | || | | || ||||||||||| ||||| || | ||| | | || | | | Sbjct 421232 ATTAGT-GCGCTTAATGCCTGGCAGAATGATAGGT--GTTACGAGAGATTCTAATGGAGA 421176 Query 158565 TAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAAC 158624 | || || | ||||| || || || | ||||| || ||||||||||| ||||| || Sbjct 421175 GGACGCTTATCGTTTAGCCCTTCAAACACGCGAGCAACACATCAGAAGAGATAAAGCCAC 421116 Query 158625 CAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATA 158684 ||| || || || || |||||||| | || ||||||||||| | | ||||| | ||| Sbjct 421115 CAGCAATATTTGTACCGCACAAGCGTTACTCGCTAATATGTCCGCAATGTATGCGGTATA 421056 Query 158685 TCATGG 158690 |||||| Sbjct 421055 TCATGG 421050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588019305573040