Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3806 176 1e-38 seq3660 154 3e-32 >seq3806 Length=402996 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| ||||| |||||||||||||| ||||| | |||||||| |||||||| Sbjct 2532 AACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCTTC 2473 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || || || || || || || || || ||||| || ||||||||||| Sbjct 2472 AAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCTTG 2413 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| || || || ||||||||||||||| ||| ||||||||||||| || || Sbjct 2412 AATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTTTT 2353 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||||||| || | ||||| Sbjct 2352 ACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || |||||| ||||| || || || || || || ||||| || | ||||||||| ||||| Sbjct 2307 CAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCATC 2248 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || | ||||| || || ||||| | ||||| || ||||||||||| ||||||||||| Sbjct 2247 CTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTC 2188 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || ||||| ||||| || || || ||| ||| || |||||||||| || Sbjct 2187 TTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATGGT 2128 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || | ||||||||| || | |||||| Sbjct 2127 TTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 147 bits (162), Expect = 5e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| || ||||| ||||| || || || || || || || | ||| || || ||||| Sbjct 2763 CAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGAAAGTGTCCTACCATC 2704 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||| ||||| || ||||| | |||||| ||||| |||||||||||||||||||| Sbjct 2703 TTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGAATGCCTTCTTTGTC 2644 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || || ||||| || || || || || ||| |||||||| || | || Sbjct 2643 TTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGAGTGATGGT 2584 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || | |||||| ||||| | ||||||| Sbjct 2583 TTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || ||||||||||| || || || | || || || || ||||| | || Sbjct 2981 TGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAGAGTGTCCTACCGTCTTCCAATTGT 2922 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || || || | ||||| ||||| ||||||||||||||||||||||| || || Sbjct 2921 TTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGGATCTTA 2862 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || ||||| || || ||||| || ||| |||||||| || | || || || || Sbjct 2861 GCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTTTTACCGGTA 2802 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | |||||| ||||| | ||||||| Sbjct 2801 AGAGTTTTCACGAAGATTTGCATT 2778 >seq3660 Length=1598725 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||||||| | || | ||||| || || ||||||||||| || | ||| || | | Sbjct 290204 AGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGC 290263 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||| || || || || |||||||| | | || ||||| || || || |||||| Sbjct 290264 CCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCT 290323 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||||||||| |||||| |||||||| ||||| || || ||||| | || Sbjct 290324 TTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTG 290383 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||||||| |||||| ||||| | |||||| Sbjct 290384 ATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||| | ||||||||||| || || ||||| |||||||| || || | | ||| Sbjct 289744 TCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGATAAAGT 289803 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||| || |||||||| || ||||| || |||| |||||| || ||||||||||| Sbjct 289804 CCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCC 289863 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || |||||||| ||| ||||| || || ||||| ||| || || || || Sbjct 289864 TTCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACCTCCAG 289923 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || || || | |||||| || || | ||||| Sbjct 289924 CGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 ||||| ||||| ||||||||||| || | ||| || | || ||||| || || || || Sbjct 290681 GTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCA 290740 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | || || || ||||| || || |||||||||||||||||||| |||| Sbjct 290741 GCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTG 290800 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || ||||| || ||||| || || ||||| | || | ||||||||||||| |||| Sbjct 290801 ACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGAGTT 290860 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 290861 TTGACGAAAATTTGCAT 290877 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || |||||||| |||||||| | ||| || | || ||||| || || || || Sbjct 290453 GTAGATTCCTTTTGAATGTTGTAATCAGAAAGTGTACGACCGTCTTCAAGTTGTTTTCCG 290512 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | | || ||||| || || || |||||||||||||||||||| |||| Sbjct 290513 GCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTG 290572 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || |||||||| ||||| || || ||||| | || | ||||||||||||| |||| Sbjct 290573 ACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTTTCCTGTCAGAGTT 290632 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 290633 TTGACGAAAATTTGCAT 290649 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 ||||| ||||| ||||||||||| || | ||| || | || ||||| || || || || Sbjct 290909 GTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCA 290968 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | || || || ||||| || || |||||||||||||||||||| |||| Sbjct 290969 GCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTG 291028 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || ||||| || ||||| || || ||||| | || | ||||||||||||| ||| Sbjct 291029 ACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGGGTT 291088 Query 195124 TTTACGAACACTTGCATT 195141 || || || | |||||| Sbjct 291089 TTGACAAAGATCTGCATT 291106 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | || |||||||| || || |||||||||||||| | | ||| | || Sbjct 291118 TCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCC 291177 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| |||||||| || || ||||| | || || || || || || || ||||| || Sbjct 291178 ATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCCTT 291237 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 || || || ||| || || |||||||| ||||| ||| || |||||||| || | Sbjct 291238 ATCCTGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTTAT 291297 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || ||||| || || ||||| | ||||| Sbjct 291298 GGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||||||| | || | ||||| || || ||||||||||| || | ||| || | | Sbjct 289976 AGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGC 290035 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||| || || || || |||||||| | | || || || || || || ||||| Sbjct 290036 CCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCC 290095 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| |||||||| ||||| ||||| || || || ||| ||| || || || || Sbjct 290096 TTGTCCTGAATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTG 290155 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| || || | ||||| Sbjct 290156 ATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109419920104013