Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq4330 86.0 8e-12 >seq4330 Length=3992391 Score = 86.0 bits (94), Expect = 8e-12 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 104862 TTAAAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTG 104921 || ||||| |||| ||| | || ||||| | |||||||| || ||| || | | Sbjct 1172264 TTGAAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTATCGGATAAAG 1172205 Query 104922 GTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACT 104981 || || | | ||| |||| ||||||||||| || || ||||| ||| || |||||| Sbjct 1172204 GTATTCACATTTGGGATGAAAATGGTTCACGGGCTTTCTTGGATTCCTGT-GACTTCACT 1172146 Query 104982 TTC-GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCT 105040 | || | || |||||||| ||||| | ||||| || || ||| | || ||| ||| Sbjct 1172145 GACAGAGAGGAGGGTGATTTGGGACCTGTCTATGGTTTCCAGTGGCGGCACTTTGGTGCT 1172086 Query 105041 CAATATATCGACTGTGATACCGACTATACCGGCCAAGGTAT 105081 |||||| ||| | || || || || || |||||||| Sbjct 1172085 GAATATAAAGACATGCACACGGATTACACAGGACAAGGTAT 1172045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658367489856440