Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq3806 197 1e-45 seq3660 154 1e-32 seq3043 96.9 3e-15 seq3840 87.8 1e-12 >seq3806 Length=402996 Score = 197 bits (218), Expect = 1e-45 Identities = 189/242 (78%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| | ||| || ||||| || ||||||||||| ||||| ||||| | Sbjct 2551 TTCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAG 2492 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || ||||||| |||| || | |||||| || ||||| |||| |||||| ||||| || | Sbjct 2491 AGAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGG 2432 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || ||||| ||||||||||| ||| ||| |||| | ||||| || | ||| | Sbjct 2431 GAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGA 2372 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 ||||||| || | ||||| || || | |||||||||||| ||||||||| | | |||| Sbjct 2371 CTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCATGCCTCCACGAA 2312 Query 101481 GA 101482 || Sbjct 2311 GA 2310 Score = 194 bits (214), Expect = 1e-44 Identities = 188/242 (78%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| | ||| ||||||||||||||||||||||| || || || || | Sbjct 3007 TTCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCG 2948 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || || || | || |||||||| ||||| ||||| |||||||| || || || || | Sbjct 2947 AGAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAG 2888 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| ||||| || || |||||| |||||| |||||||| | ||| | Sbjct 2887 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 2828 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||||||||||| ||||| ||||| | |||||| || || || ||||| | | |||| Sbjct 2827 CTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATTCCTCCTCGAA 2768 Query 101481 GA 101482 || Sbjct 2767 GA 2766 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | ||| | |||||| |||||||| || || || ||||| || | Sbjct 2321 CCTCCACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAA 2262 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| |||| || |||||||| || ||||| |||||||| || ||||| || ||| Sbjct 2261 AGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 2202 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||| || || ||| ||| | || | ||| ||||| | ||| || Sbjct 2201 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACC 2142 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | ||||| || || | |||||||||||| || |||||| Sbjct 2141 TCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCATG 2094 Score = 158 bits (174), Expect = 1e-33 Identities = 180/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| | ||| | |||||| || ||||| || || || || || || | Sbjct 2779 TTCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTG 2720 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || || |||| ||||| || ||||| ||||| ||||| || || || || || | Sbjct 2719 AAAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAG 2660 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| ||||| || || |||||| |||||| || ||||| | ||| | Sbjct 2659 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAA 2600 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||||||||||| ||||| ||||| | |||||| || || || ||||| | | |||| Sbjct 2599 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATTCCTCCTCGAA 2540 Query 101481 GA 101482 || Sbjct 2539 GA 2538 Score = 150 bits (166), Expect = 1e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 ||||||||||| || || || ||||||||||| || |||||||| | | ||||||| || Sbjct 3449 CGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCA 3390 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||| ||| || || || || |||| |||||||||||| || ||||| || ||||| Sbjct 3389 TCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTG 3330 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || || ||||| || || |||| | || || || | ||| ||||| || || | Sbjct 3329 TCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATT 3270 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||||| ||||| | |||||| || || || ||||| | | |||||| Sbjct 3269 GTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATTCCTCCTCGAAGA 3222 Score = 143 bits (158), Expect = 2e-29 Identities = 177/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||| | ||| ||||| | ||||| || |||||||| || || |||||||| | Sbjct 3235 TTCCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAG 3176 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||||||| |||| || | ||| || || || || |||| |||||||||||| || | Sbjct 3175 AAAGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTG 3116 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || ||||| || || ||||| || || |||| | || || || | ||| | Sbjct 3115 GAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAA 3056 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||| || || | ||||| ||||| | |||||| || || || ||||| | | |||| Sbjct 3055 CTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATTCCTCCTCGAA 2996 Query 101481 GA 101482 || Sbjct 2995 GA 2994 >seq3660 Length=1598725 Score = 154 bits (170), Expect = 1e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||||||||| || || ||||| || || ||||||||||| | | ||| | |||| || Sbjct 291124 AACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCCATCTTC 291183 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || ||||| || ||||| ||||||||||| ||||| || || || ||||| ||||| || Sbjct 291184 CAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCCTTATCCTG 291243 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || ||| ||||||| | || | ||||||||| | || ||||||||||| | || || Sbjct 291244 GATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTTATGGTCTT 291303 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || || || || || || ||||||||||| Sbjct 291304 CCCCGTCAATGTCTTCACGAAAATCTGCATGGT 291336 Score = 131 bits (144), Expect = 1e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 101235 AGACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGT 101294 |||||| ||| ||||| | || | || | ||||| ||||||||||| || ||||| | Sbjct 289731 AGACATCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTAT 289790 Query 101295 AATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGAT 101354 | || | | ||| | |||| || | ||||| || || || |||| | ||||||| Sbjct 289791 AGTCTGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGAT 289850 Query 101355 CGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACG 101414 |||| ||||||||||||||||| |||||||| || || |||| | ||||| || | Sbjct 289851 CGGGAGGAATGCCTTCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAG 289910 Query 101415 TTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || | ||||| || || | |||||| ||||| |||||||| Sbjct 289911 CCTCGACCTCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | |||||| | ||| ||||| | || |||||||| || |||||||| || | Sbjct 290879 CCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAA 290938 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | ||| || || || || ||||| | ||| ||||| || || Sbjct 290939 AGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGG 290998 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||||||||| || ||| | || | ||||| |||| || ||| Sbjct 290999 ATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACT 291058 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || || | ||||| ||||| |||||||| Sbjct 291059 TCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 291105 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | |||||| | ||| ||||| | || |||||||| || |||||||| || | Sbjct 290651 CCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAA 290710 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | ||| || || || || ||||| | ||| ||||| || || Sbjct 290711 AGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGG 290770 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||||||||| || ||| | || | ||||| |||| || ||| Sbjct 290771 ATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACT 290830 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || || | |||||| || || || ||||| Sbjct 290831 TCCAACGTGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||| | || | ||| | ||||||||| ||||| || |||||||| | Sbjct 290423 CCACCACGTAGACGAAGGACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCAGAA 290482 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | || || | ||| || || || || ||||| | ||| || || || || Sbjct 290483 AGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGG 290542 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||||||||| || ||| | || | |||||| |||| || ||| Sbjct 290543 ATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACT 290602 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || || | |||||| || || || ||||| Sbjct 290603 TCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| ||||| | || ||||| || || |||||||| || | | || | | || Sbjct 290210 AAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCT 290269 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | ||| || || || || ||||| | ||| || || || || || |||||||| ||| Sbjct 290270 TCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCT 290329 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 |||||||| || ||| | || | |||||| |||| || ||||| | |||| || Sbjct 290330 TGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTC 290389 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | |||||| || || || ||||| Sbjct 290390 TTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 >seq3043 Length=1629123 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 ||||||| || |||||||||| | ||| | |||| |||| || || || || || | Sbjct 1068045 CTTTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 1067986 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | | ||||||||||| |||||||| || || || || || || || || ||| | | Sbjct 1067985 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCT 1067926 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | ||| ||||| | || || || || || | ||||| || || | ||||| || | Sbjct 1067925 CGATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGA 1067866 Query 101460 ATATCTGCATGGT 101472 | ||||||||||| Sbjct 1067865 AGATCTGCATGGT 1067853 >seq3840 Length=147269 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| || || | ||||| || | |||||||| ||||| || || || || | Sbjct 133579 CCACCTCGCAAGCGCAGCACTAAGTGTAAAGTAGATTCCTTTTGGATGTTATAGTCCGAC 133638 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| |||| || ||||||||||| ||||| ||||| | || ||||| |||||| Sbjct 133639 AAAGTTCTGCCATCTTCTAATTGCTTACCGGCAAAGATCAATCTTTGCTGATCTGGCGGA 133698 Query 101363 ATGCCT 101368 || ||| Sbjct 133699 ATTCCT 133704 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425 ||||| ||||||||||||||| ||| ||| |||| | ||||| || | ||| || ||| Sbjct 134064 CCTTCCTTATCTTGAATTTTTGTTTTAACATTTTCGATCGTGTCCGATGCTTCAACCTCA 134123 Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGA 101479 || |||| || || || || | |||||| ||||| || |||||| ||| |||| Sbjct 134124 AGGGTGATAGTCTTCCCCGTAAGAGTTTTCACAAAGATTTGCATGATTA-GCGA 134176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396257444179023