Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3806 125 5e-24 seq3660 114 1e-20 seq3043 107 1e-18 >seq3806 Length=402996 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| |||||||||||||| |||||||| ||| ||| | || || Sbjct 2531 ACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCTTCA 2472 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||| || ||||| ||||| ||||| ||||||| ||||| ||||| ||||| | Sbjct 2471 AGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCTTGA 2412 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || ||| ||| | | | || || || || || || | ||||| ||||| Sbjct 2411 ATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTTTTA 2352 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | |||||||||||| |||||||| Sbjct 2351 CCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||| || |||||| ||||| ||||| ||||||||||| ||| ||| Sbjct 3224 AGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTTCTG 3165 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || || ||||| || ||||| ||||||||||||| |||| ||||| Sbjct 3164 CCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCT 3105 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || || | | | ||||| || || || || | ||| Sbjct 3104 TTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTA 3045 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | |||||| || || || ||||| Sbjct 3044 ATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || | ||| ||||| || || || || ||||| ||||| ||| ||| Sbjct 2312 AGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTG 2253 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || || ||||| || ||||| |||| || || ||||| | |||| || || Sbjct 2252 CCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCT 2193 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| ||| | | || || || || || ||||| | ||| Sbjct 2192 TTGTCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTA 2133 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || | |||||||||||| || ||||| Sbjct 2132 ATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || || || || || || ||| |||||||| || ||||||||||| ||| ||| Sbjct 3452 AGTCGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTG 3393 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| || || ||||| || ||||| ||||||||||||| |||| ||||| Sbjct 3392 CCATCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCT 3333 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || || | | | ||||| || || || || | ||| Sbjct 3332 TTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTA 3273 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | |||||| || || || ||||| Sbjct 3272 ATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3235 >seq3660 Length=1598725 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 || ||||| || ||| || || ||||||||||||||||| | | | || | || ||| Sbjct 291125 ACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCCATCTTCC 291184 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| |||||||| |||| ||||| ||||| | || | || ||||| || Sbjct 291185 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCCTTATCCTGG 291244 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| ||||||| | | || || || ||||| || || | || || || || Sbjct 291245 ATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTTATGGTCTTC 291304 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 |||||||| || || || ||||||||||| ||| Sbjct 291305 CCCGTCAATGTCTTCACGAAAATCTGCATGGTG 291337 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||| ||| |||||||| | ||| || || ||||||||||| ||||| || | || Sbjct 289976 AGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGC 290035 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | || || ||||| || |||| | ||| ||||||| || | || ||| Sbjct 290036 CCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCC 290095 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || ||| ||| | | | ||||| || || ||||||| ||| Sbjct 290096 TTGTCCTGAATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTG 290155 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | |||||| |||||||||||||| Sbjct 290156 ATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| |||||||| || || |||| | | || | || || | |||||| || || || Sbjct 289775 TCTTTCTGAATATTATAGTCTGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAA 289834 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||||| |||||||| | |||| ||| || || || ||| || || || Sbjct 289835 ATCAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTATCCTGAATTTTCGCCTTCACGTTT 289894 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| ||||| ||||||| |||||| ||||| || || | |||||| ||| Sbjct 289895 TCGATCGTGTCTGAAGCCTCGACCTCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACA 289954 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 289955 AAAATCTGCAT 289965 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| | ||| ||||| ||||||||||| ||||| || | || |||| || Sbjct 290669 ACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCA 290728 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || || || || || |||| || ||| ||||| | ||| | || || ||||| | Sbjct 290729 AGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGA 290788 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || || ||| | | | ||||||||||| || |||| ||| || || ||| Sbjct 290789 ATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTT 290848 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| |||||| || ||||| ||||| Sbjct 290849 CCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| | ||| ||||| ||||||||||| ||||| || | || |||| || Sbjct 290897 ACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCA 290956 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || || || || || |||| || ||| ||||| | ||| | || || ||||| | Sbjct 290957 AGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGA 291016 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || || ||| | | | ||||||||||| || |||| ||| || || ||| Sbjct 291017 ATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTT 291076 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| ||||| ||||| |||||||| Sbjct 291077 CCTGTCAGGGTTTTGACAAAGATCTGCAT 291105 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||| ||| |||||||| | ||| || || ||||||||||| ||||| || | || Sbjct 290204 AGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGC 290263 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | || || ||||| || |||| | ||| || |||| || | || || Sbjct 290264 CCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCT 290323 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || || ||| | | || ||||||||||| || |||| || Sbjct 290324 TTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTG 290383 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||| |||||| || ||||| ||||| Sbjct 290384 ATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || |||||||| ||||||||||| || | ||| |||| || | || || ||||| || Sbjct 290459 TCCTTTTGAATGTTGTAATCAGAAAGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAG 290518 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| | ||| || |||| || | || || ||||| ||| || || ||| Sbjct 290519 ATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTC 290578 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || ||||||||||| || |||| || || || ||||| |||| |||||| || Sbjct 290579 TCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACG 290638 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 290639 AAAATTTGCAT 290649 >seq3043 Length=1629123 Score = 107 bits (118), Expect = 1e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 ||||||| || |||||||| || | | | || | || |||| ||| || ||||| || | Sbjct 1068045 CTTTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 1067986 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | |||||||||||||| | |||| ||||||||||| ||||| || ||| Sbjct 1067985 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCT 1067926 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || || || ||||| ||||| | ||||| ||||| ||||| | ||||| || | Sbjct 1067925 CGATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGA 1067866 Query 48757 AAATCTGCATCGTG 48770 | |||||||| ||| Sbjct 1067865 AGATCTGCATGGTG 1067852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380917455424497