Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3446 113 8e-20 seq3973 84.2 4e-11 >seq3446 Length=926834 Score = 113 bits (124), Expect = 8e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||||| ||| || || ||||| |||| | |||||| || ||||||||||| ||||| Sbjct 502251 CTTGAGCAGCTTGACCTTGTCCTCGAGCCTGGAGATGCGCTCGAGTTTGCGCCGTCGGCA 502310 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||| |||| |||||||| | | ||| | ||| |||||| ||||||| Sbjct 502311 CTTGGAGGCGGCCACGCGGTTCCTCTGCCGCTTCCTCTCCAGCTTGATCTTCTCCTGGTT 502370 Query 241609 CTCCATGTCGATCGGAGACTTGGGT 241633 ||||||||||||||| ||| | ||| Sbjct 502371 CTCCATGTCGATCGGCGACATCGGT 502395 >seq3973 Length=340871 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||||||||| || | ||| ||||| || || || || || ||||| | || || Sbjct 331 GTACATCTCAGAATGAATATTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTC 390 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | | ||||||| | |||| |||| | |||||||||||| || || ||||| || Sbjct 391 GGGAATTTTCACTTCTTGGCTGAATTTCTCAATCAGATTCTCATTAACGATACCATCGGA 450 Query 48544 AGCAGCAAAGAAGGCAAGGACATG 48567 ||| |||||||| || | |||||| Sbjct 451 AGCGGCAAAGAATGCTAAGACATG 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931482275989760