Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3306 125 8e-24 >seq3306 Length=2425807 Score = 125 bits (138), Expect = 8e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||||||||| | ||||| || ||||| || || ||||| ||||| || |||||| Sbjct 419798 ACTCCAATAGGACCCATACCAGGTCCGCCACCCCCGTGAGGAATGCAGAACGTTTTATGT 419857 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | || || ||||| |||| ||| | || || || ||| Sbjct 419858 AGATTGAGATGTGACACGTCACTGCCATAATCACCAGGTCGACACAAGCCAACTTGAGCA 419917 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| | |||||| |||||||| || || || || || ||||| Sbjct 419918 TTCATATTGGCGCCATCCAAATATACTTGACCACCGGCGTTGTGTACCATGTTGCATATA 419977 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | || || | ||||||||| |||| ||||||||||| || ||||| | |||||| Sbjct 419978 TCACTAATCGTCTCTTCAAATACTCCATTTGTCGATGGATACGTGATCATCAAACATGA 420036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578966996574280