Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq3063 84.2 3e-11 seq3062 84.2 3e-11 >seq3063 Length=6017 Score = 84.2 bits (92), Expect = 3e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 71418 GGTAGGAATCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC-GCTGAGCTA 71476 ||||||| |||||||||||||| || ||||||||||| |||||||||||| ||||||||| Sbjct 2860 GGTAGGATTCGAACCTACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAGCTGAGCTA 2919 Query 71477 C 71477 | Sbjct 2920 C 2920 >seq3062 Length=5877 Score = 84.2 bits (92), Expect = 3e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 71418 GGTAGGAATCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC-GCTGAGCTA 71476 ||||||| |||||||||||||| || ||||||||||| |||||||||||| ||||||||| Sbjct 2870 GGTAGGATTCGAACCTACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAGCTGAGCTA 2929 Query 71477 C 71477 | Sbjct 2930 C 2930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572023373199480