Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3806 132 9e-26 seq3660 127 4e-24 seq3043 109 1e-18 >seq3806 Length=402996 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| |||||| | || | ||| | || | || || ||| ||||| || Sbjct 2780 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCT 2721 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| | |||| ||||| ||||||||||||||||| |||| || || ||||| Sbjct 2720 GAAAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGA 2661 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || ||| |||||| || ||| | ||| || | ||| Sbjct 2660 GGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCA 2601 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||| ||||||||||| || | ||||| | || || |||||| Sbjct 2600 ACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| |||||| | || ||||| | |||| ||||| || ||||| || Sbjct 3008 ATTCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCC 2949 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| | | || |||||||||||||||||||| || || | || || ||||| Sbjct 2948 GAGAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGA 2889 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || ||| |||||| || ||| | || || | ||| Sbjct 2888 GGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 2829 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||| ||||||||||| || | ||||| | || || |||||| Sbjct 2828 ACTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | |||||| | || | ||| | |||| || || ||| || || ||| Sbjct 2324 ATGCCTCCACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCA 2265 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| |||| || ||||| || ||||||||||| || | || ||||| || Sbjct 2264 GAAAGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGA 2205 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || ||| ||| ||||| |||| ||| || | |||| Sbjct 2204 GGAATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCT 2145 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||||||||| ||||| | ||||| | ||| || ||||| Sbjct 2144 ACCTCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| |||||| | || || || | || | ||||| |||||||||||| Sbjct 2552 ATTCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCA 2493 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| |||| || | ||| || |||||||| || | | ||| ||||| || Sbjct 2492 GAGAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 2433 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| ||||| ||||| ||||| ||| ||||| || | || || | ||| Sbjct 2432 GGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCG 2373 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || |||||||||||||| || | ||||| | ||| |||||||| Sbjct 2372 ACTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 >seq3660 Length=1598725 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| | || || ||||| || || | || || ||||| || ||| Sbjct 289964 ATACCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCA 290023 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || | || || | |||||| || || ||||| || ||||| ||||| ||| Sbjct 290024 GAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGT 290083 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || |||||| ||| ||||| || | |||||| | ||| Sbjct 290084 GGGATACCTTCCTTGTCCTGAATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCG 290143 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || ||||||||||| | ||||| | ||| |||||||| Sbjct 290144 ACCTCCAGCGTGATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 |||||||| | ||| | || || ||||| |||||||| || || ||| |||| ||| Sbjct 291125 ACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCCATCTTCC 291184 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | || || || |||||||| || | ||| ||||||||||| || ||||| ||||| || Sbjct 291185 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCCTTATCCTGG 291244 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || ||||||||| |||| || || | || ||||| ||||| ||||| || Sbjct 291245 ATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTTATGGTCTTC 291304 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || | || |||||||| Sbjct 291305 CCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 120 bits (132), Expect = 6e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | ||| | || ||||| || || | ||||| ||||| || ||| Sbjct 290876 ATACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCA 290935 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || || | |||||| ||||| ||||| |||||||| ||||| || Sbjct 290936 GAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGG 290995 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| ||||| || ||||| || | ||||||| || Sbjct 290996 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCA 291055 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | || ||||| || || || | ||||| | ||| ||||||||| Sbjct 291056 ACTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 291106 Score = 113 bits (124), Expect = 9e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || |||||||| || | ||| | || | |||| ||||| |||||||| || ||| Sbjct 289739 CCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGAT 289798 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || ||| |||| || | || || || || || || | ||| |||||||| || || Sbjct 289799 AAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGA 289858 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||||||||| || ||||| || || || || | ||||| | || || Sbjct 289859 ATGCCTTCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACC 289918 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||||||||| | ||||| | ||| |||||||| Sbjct 289919 TCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | ||| | || ||||| || || | ||||| ||||| || ||| Sbjct 290648 ATACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCA 290707 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || || | |||||| ||||| ||||| |||||||| ||||| || Sbjct 290708 GAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGG 290767 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| ||||| || ||||| || | ||||||| || Sbjct 290768 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCA 290827 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || ||||| || || || | ||||| | || || ||||| Sbjct 290828 ACTTCCAACGTGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 107 bits (118), Expect = 4e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | ||||| | || | ||| || |||| || ||| || || || ||||| Sbjct 290420 ATACCACCACGTAGACGAAGGACCAGATGCAAGGTAGATTCCTTTTGA-ATGTTGTAATC 290478 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| | ||| || | || || | |||||| || || ||||| || ||||| || || || Sbjct 290479 AGAAAGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGG 290538 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| ||||||||||| ||||| ||||| || ||||| |||| ||||||| || Sbjct 290539 TGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTC 290598 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || || || || || | ||||| | || || ||||| Sbjct 290599 AACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| | || || ||||| || || | || || ||||| || ||| Sbjct 290192 ATACCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCA 290251 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || | || || | |||||| || || ||||| || ||||| || || ||| Sbjct 290252 GAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGT 290311 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| ||||| || ||||| |||| ||||||| || Sbjct 290312 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCA 290371 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || || || || || | ||||| | || || ||||| Sbjct 290372 ACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 >seq3043 Length=1629123 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || ||||| || || || ||| |||| |||| ||||| || || ||||| | || Sbjct 1068038 GATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGATGAGTCG 1067979 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||||||||| || || ||||| || || || || || ||| || ||||| |||| Sbjct 1067978 CTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATAGT 1067919 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || | ||||| || || |||||||||||||| || | ||||| | || ||||| Sbjct 1067918 ATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAGATCTG 1067859 Query 192534 CAT 192536 ||| Sbjct 1067858 CAT 1067856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984425269372650