Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3806 141 2e-28 seq3660 122 2e-22 seq3043 104 4e-17 >seq3806 Length=402996 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||| || | || ||||| | |||| ||||| ||| ||||| || Sbjct 3008 ATTCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCC 2949 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | | |||| ||||||||||||||||||||||| || | || |||||||| Sbjct 2948 GAGAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGA 2889 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || ||| |||||| || ||| || || || | ||| Sbjct 2888 GGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 2829 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| ||||| ||||||||||| || | ||||| | ||| || |||||| Sbjct 2828 ACTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 129 bits (142), Expect = 1e-24 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| |||||||||||||| || |||| || |||||||| || || |||||||| Sbjct 2705 TCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGAATGCCTTCTTTG 2646 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || ||| |||||| || ||| ||||| || | ||| ||||| ||||| ||| Sbjct 2645 TCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGAGTGATG 2586 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 |||||||| || | ||||| | ||| || |||||| Sbjct 2585 GTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||| || | || || || | || | ||||| |||||||||||| Sbjct 2552 ATTCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCA 2493 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | ||| || ||||||||||| | | ||| || || || Sbjct 2492 GAGAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 2433 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| ||||| ||||| ||| ||||| || || || || | ||| Sbjct 2432 GGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCG 2373 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || |||||||||||||| || | ||||| | || |||||||| Sbjct 2372 ACTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 100 bits (110), Expect = 5e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || ||||| || |||||||| || || | || || || || || || |||||||| Sbjct 2249 TCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTG 2190 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || ||| ||| ||||| |||||||| || | |||||| || || |||||| Sbjct 2189 TCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATG 2130 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| | ||||| | || || ||||| Sbjct 2129 GTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 >seq3660 Length=1598725 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || ||||||||||| | ||| | || | |||| ||||| ||||||||| |||||| Sbjct 289739 CCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGAT 289798 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| ||| | || || | || || || || ||||| | ||| ||||| || || || Sbjct 289799 AAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGA 289858 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||||||||| || ||||| || || || || || ||||| | || || Sbjct 289859 ATGCCTTCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACC 289918 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||||||||| | ||||| | || |||||||| Sbjct 289919 TCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| | || || ||||| || || | || || |||||| || || Sbjct 289964 ATACCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCA 290023 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| || || || || || ||||| || || ||| Sbjct 290024 GAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGT 290083 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || |||||| ||| ||||| || |||||||| | ||| Sbjct 290084 GGGATACCTTCCTTGTCCTGAATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCG 290143 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || ||||||||||| | ||||| | || |||||||| Sbjct 290144 ACCTCCAGCGTGATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| | || || ||||| || || | || || |||||| || || Sbjct 290192 ATACCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCA 290251 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| || || || || || ||||| ||||| ||| Sbjct 290252 GAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGT 290311 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| ||||| || ||||| ||||| ||||||| || Sbjct 290312 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCA 290371 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || || || || || || | ||||| | ||| || ||||| Sbjct 290372 ACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | | || | || ||||| || || | ||||| |||||| || || Sbjct 290876 ATACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCA 290935 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| ||||| || || |||||||| || || || Sbjct 290936 GAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGG 290995 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| ||||| || ||||| || || ||||||| || Sbjct 290996 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCA 291055 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || ||||| || || || | ||||| | || ||||||||| Sbjct 291056 ACTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 291106 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || | ||| || |||| || || ||| || ||||| Sbjct 290420 ATACCACCACGTAGACGAAGGACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCA 290479 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| || || || || || ||||| ||||| ||| Sbjct 290480 GAAAGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGT 290539 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| ||||| || ||||| ||||| ||||||| || Sbjct 290540 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCA 290599 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || || || || || || | ||||| | ||| || ||||| Sbjct 290600 ACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | | || | || ||||| || || | ||||| |||||| || || Sbjct 290648 ATACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCA 290707 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| ||||| || || |||||||| || || || Sbjct 290708 GAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGG 290767 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| ||||| || ||||| || || ||||||| || Sbjct 290768 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCA 290827 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || ||||| || || || | ||||| | ||| || ||||| Sbjct 290828 ACTTCCAACGTGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 >seq3043 Length=1629123 Score = 104 bits (114), Expect = 4e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| || |||| ||| | || |||| ||||| || || || || | || | Sbjct 1068037 ATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGATGAGTCGC 1067978 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 ||||| || || || ||||| || || || || || ||| || ||||| |||||| Sbjct 1067977 TGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATAGTA 1067918 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || | ||||| || || |||||||||||||| || | ||||| | ||| |||||| Sbjct 1067917 TCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAGATCTGC 1067858 Query 172068 AT 172069 || Sbjct 1067857 AT 1067856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905086907686200