Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3501 104 7e-17 seq3653 98.7 3e-15 seq3732 84.2 6e-11 >seq3501 Length=2462047 Score = 104 bits (114), Expect = 7e-17 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 60143 GTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAATT 60200 |||||||| || ||||||| || | ||||| ||||| ||| | || || |||| Sbjct 1156809 GTGAAAATGTA--TCTCGGACTGGCAGAATCCTTTCCACCAGCAAGTCTTGTACCGAATT 1156752 Query 60201 GTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCAA 60260 | ||| | ||||| | |||||||||||||| || |||||||| || |||||| || Sbjct 1156751 GACCGATGGGCTGTAGCAGATTAATGTTGTTGCTACCCACGAAATTCTGCGCGAGATTAA 1156692 Query 60261 CAATAG-CACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATAT 60319 | || | | |||| | | || ||||||||||||| |||||||||| | |||| || Sbjct 1156691 CTATGGTCGCCATCAGAGACGTCT-CACCGTGATGATAAGCAGAATGTTCGGCAACAGAT 1156633 Query 60320 CCACTGAATTGTGCGACTTTAATTTCG 60346 || ||||| |||||||| | |||| Sbjct 1156632 CCCGCCAATTGCGCGACTTTCACTTCG 1156606 Score = 102 bits (112), Expect = 2e-16 Identities = 169/243 (70%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 ||| || ||||| ||||| || || ||||||| || || ||||||||| | Sbjct 952347 AAACAAGTCTCTAACACGCCGAGCACCCTGACCAACGAGAATCTCATCAAATTCAGGGCC 952406 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 | || || | ||||| |||| ||||| || || ||||| | ||| | | |||||| Sbjct 952407 TGCCACATGGAAGAATGGTACACCGGCTTCTCCAGCGACTGCACGCGCTAACAATGTCTT 952466 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA---GCAGA 289265 |||||||| || || || |||| | |||||||| || | ||| | ||| || || Sbjct 952467 TCCTGTTCCTGGCGGACCGACTAACAACACTCCCTTCGGCAACTTTCCACCAAGGGCGGA 952526 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 | |||| |||||| |||||||||||||||| | | | ||| || | |||||||| Sbjct 952527 ---AAATTTATCAGGGTTCTTTAAAAATTCTACGACGTTCAGAAGCTCTTGCTTTGCCTC 952583 Query 289326 ATC 289328 ||| Sbjct 952584 ATC 952586 >seq3653 Length=922873 Score = 98.7 bits (108), Expect = 3e-15 Identities = 122/164 (74%), Gaps = 11/164 (7%) Strand=Plus/Plus Query 303637 TGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTCCGCAACG-TT 303695 ||||||||||| || || |||||||| |||||||| |||||| |||| | || | || Sbjct 658193 TGTAAATTCATTTCGTCCCCGTCAAAGTCAGCATTGTACGGCGATGTG-CAGCTTAGATT 658251 Query 303696 CATCCGGAAAGTATCACCCTGCATCA---TAACACGGGCTTTATGACACATCATAGACAT 303752 ||| ||||| ||| | | | | || ||||||| ||||| ||||||| ||| Sbjct 658252 CATGCGGAATGTACTCCACGGAAGCACCTTAACACG------ATGACCCATCATACTCAT 658305 Query 303753 TCTGTGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACCGT 303796 |||||||||| |||||||||||||| | ||| | ||||||| Sbjct 658306 CTTGTGTAGAGTAGGCTGACGATTGAAGATTACGAGATCACCGT 658349 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| || ||||||||||||||||| |||||||| || || ||||| || ||| Sbjct 657098 TCCATAGCTTTTATTAAACGACGCTGAATGTAACCAGTCTCAGCCGTCTTTACGGCGGTA 657157 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || ||||| ||||||||||||| || || ||| | | ||| || ||| || || Sbjct 657158 TCGATAAGACCTTCACGACCACCCATTGCGTGAAAGTAGAACTCGGAAGG-CGTGAGACC 657216 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 | | | | || |||| || |||||||| | ||| || || ||| ||| | || Sbjct 657217 AGCGAGATACGAATTCTCGACAAAACCACGGGACTCTGGTCCATAGTCATCCTTAATGAA 657276 Query 302754 GTGTGGCAGGGTCCTGTT 302771 |||||||| || || || Sbjct 657277 ATGTGGCAGCGTTCTCTT 657294 >seq3732 Length=827884 Score = 84.2 bits (92), Expect = 6e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 |||||||||||| || |||||||| |||||||| || ||||||||| | || || || Sbjct 411514 ATAGTCATACGAGAAGGGATAGCATGAGGATTGATAATAATGTCGGGTGTAAGACCTTCG 411455 Query 251905 GCAGTGAAGGGCATATCCTTTTCCTCAATAATG-TTTCCAATAGTTCCCTTTTGTCCGTG 251963 | || ||| ||||| | ||| | || || || |||| || |||||||||||||| Sbjct 411454 GAAGAGAAAGGCATGT-CTTCTTGTCTGTACTGAATTCCGCATGTACCCTTTTGTCCGTG 411396 Query 251964 ACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTACA 252023 ||| || || || || || || ||| || ||||| || | || | ||| || Sbjct 411395 ACGCGACGCAAATTTGTCGCCGATTTGCGGAATACGTACACTGCGCACTCGGATCTTGCA 411336 Query 252024 GAAGTTGTAACCATC 252038 ||| || || || || Sbjct 411335 GAATTTATATCCTTC 411321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471735776600243