Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3973 233 2e-56 seq3806 113 4e-20 seq3660 91.5 1e-13 >seq3973 Length=340871 Score = 233 bits (258), Expect = 2e-56 Identities = 324/454 (71%), Gaps = 0/454 (0%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 |||||| ||||||| || | ||||| | ||| || | | || ||| |||| Sbjct 7454 CGGCGGATTTTTCAAGATATACGTGTTCAACTTGTGATTGCTCTCAAGAAGGCCATGATG 7513 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 || || || ||||| ||||| | || || ||| || | || || | || || Sbjct 7514 TCCACACGCCTTGCAACCCTGTGAAATCGTGCCCTTCTTTGAACTGACCATTAATTCGGT 7573 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||| || || || |||| || | ||| | || || ||||||||||| ||||| || Sbjct 7574 TTCCGGATTATCGCAGGCCGGGCAAAGAACATATTTTCGAATGAAACCATCCAGCAGATC 7633 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGAC 34442 |||||||| | ||||| ||||||||||||||||| |||||||| ||| | |||| Sbjct 7634 TTGTAACTTTGTCGCATCGTGTGAGCCGTTGACGATGAAGCGTTCGTTCTTGAAGTCGAA 7693 Query 34443 CTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCC 34502 ||| || || ||||||| ||| || ||||| ||||| ||||| || | |||||||| || Sbjct 7694 CTGTGTCTGAGCGCCCAACTCACAACCGAAATACTTAGTCGGATATGTAGCCGGACGACC 7753 Query 34503 AAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCC 34562 | |||||| |||| || |||||||||||| || ||||| || || || || || || Sbjct 7754 GATCGCCTTCGCGACATCCACCATGTTGACGATCACTGTCTTAATACCATTTCCTTTGCC 7813 Query 34563 TTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCG 34622 ||| || || || ||| |||||||| || || ||||| || || || |||||||| Sbjct 7814 TTCTACTTTTGCCTGGATCCGCGGCATCTTATAACGGTAAAAAGCATCGCTAACATTGCG 7873 Query 34623 GTTAACGTTCACAGTCCCCATCGTGGCTGGTGTT 34656 || ||||| || ||||||| ||| | | |||| Sbjct 7874 ATTGACGTTTACGCTCCCCATGGTGACCGATGTT 7907 >seq3806 Length=402996 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || || |||||| | ||||| ||||| |||||| ||||| || || Sbjct 3006 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACAATTACCCTCGAAGTTGAAGCTTC 3065 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | || || || || |||||||| || | || |||||| Sbjct 3066 AGATACCATCGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCACCGGATCA 3125 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || |||| || || ||||| || || |||| |||||| | | |||||||| Sbjct 3126 ACAGCGTCTGATTTTCGCCGGCAAACAACTAGAAGATGGCAGAACTCTTTCTGATTACAA 3185 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||| |||||||| ||| | ||| |||| || | || ||||| |||| Sbjct 3186 CATTCAGAAAGAATCCACGCTTCACCTGGTTTTGCGTCTTCGAGGAGGAA 3235 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || || |||||| | ||||| ||||| |||||| ||||| || || Sbjct 3234 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACAATTACCCTCGAAGTTGAAGCTTC 3293 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | || || || || |||||||| || | || |||||| Sbjct 3294 AGATACCATCGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCACCGGATCA 3353 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || |||| || || ||||| ||||| |||| |||||| | | |||||||| Sbjct 3354 ACAGCGTCTGATTTTCGCCGGCAAACAACTGGAAGATGGCAGAACTCTTTCTGATTACAA 3413 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| ||||||||||| || | ||| | || ||| |||| || || || Sbjct 3414 CATCCAAAAAGAATCCACACTCCACTTAGTTTTACGACTTCGCGGAGG 3461 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTG 110330 ||||||||| || || |||||| | ||||| |||||||| || | ||| || |||| Sbjct 2778 AATGCAAATCTTCGTGAAAACTCTTACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 2837 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 || || | | | |||||| ||||| |||||||||||| | || || | Sbjct 2838 T-GACACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACC 2896 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 | ||| | | |||| ||| |||||||| |||| || | || ||| | |||| || | Sbjct 2897 AGCAACGTTTGATTTTTGCTGGTAAACAATTGGAAGACGGTAGGACACTCTCGGACTATA 2956 Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||||||||||||||||| | || |||| | | || ||||| |||| Sbjct 2957 ACATTCAAAAAGAATCTACCCTTCATTTGGTTCTGCGTCTTCGAGGAGGAA 3007 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| |||||| | || || |||||||||||| | ||| || || Sbjct 2323 ATGCAGATCTTTGTAAAAACTCTTACGGGTAAAACCATTACCCTTGAAGTCGAAGCTTCG 2382 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| || ||| |||||||| || | ||| |||||| Sbjct 2383 GACACCATTGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCGGATCAG 2442 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || |||| ||| || || || || || |||| |||||| | | ||||| || Sbjct 2443 CAGCGTCTGATTTTTGCTGGCAAGCAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 2502 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||||||||||| || | ||| |||| | | || ||||| |||| Sbjct 2503 ATTCAAAAAGAATCCACACTTCACTTGGTTCTTCGTCTTCGAGGAGGAA 2551 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 ||||| | |||||||| ||||| |||||| | || || |||||||||||| | || Sbjct 2086 AGATTCATCATGCAAATCTTTGTAAAAACTCTCACTGGAAAAACCATTACCCTTGAGGTA 2145 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 || || |||||| ||| | || ||| ||||| ||||||||||| | || Sbjct 2146 GAAGCTTCTGATACTATCGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCT 2205 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 ||||| ||| | | || | ||| || || || | ||||||| |||||| | | Sbjct 2206 CCAGATCAGCAACGTTTGATCTTTGCTGGAAAGCAATTAGAGGATGGCAGAACTCTTTCT 2265 Query 110444 GATTACAACATTCAAAAAGAATCTACG 110470 || |||||||| || || ||||||||| Sbjct 2266 GACTACAACATCCAGAAGGAATCTACG 2292 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTG 110330 ||||||||| || || |||||| | ||||| |||||||| || | ||| || |||| Sbjct 2550 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 2609 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 ||||| | | | |||||| ||||| |||||||||||| | || || | Sbjct 2610 T-GATACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACC 2668 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 | ||| || | || | ||| ||||||||| |||| |||| || ||| | | || || | Sbjct 2669 AGCAACGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGGACACTTTCAGACTATA 2728 Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||| || || ||||| ||| | || |||| | | || ||||| |||| Sbjct 2729 ACATCCAGAAGGAATCCACGCTTCATCTGGTTCTGCGTCTTCGAGGAGGAA 2779 >seq3660 Length=1598725 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||||||| | || || ||||| ||||| | || ||| || Sbjct 289965 ATGCAGATTTTTGTCAAAACTCTCACTGGTAAAACTATTACGCTGGAGGTCGAGGCTTCA 289906 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || ||| ||| || ||||||||| | || |||||| Sbjct 289905 GACACGATCGAAAACGTGAAGGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAA 289846 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| ||||| || ||||| ||||||| | || | | || || || Sbjct 289845 CAAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCAGACTATAAT 289786 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| ||||||||||| | ||| | || | |||| |||| ||| Sbjct 289785 ATTCAGAAAGAATCTACACTTCACCTTGTACTTCGACTTAGAGGCGGA 289738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412819768291127