Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3806 109 4e-19 seq3043 109 4e-19 seq3660 100 2e-16 >seq3806 Length=402996 Score = 109 bits (120), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || || | | |||| || | ||||||||| || ||| Sbjct 2285 TCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAG 2226 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||| ||| | || | || || ||||| | || || |||||| || Sbjct 2225 ATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTAGCTTTGAC--AT 2168 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | ||| || || || |||| ||| ||||| ||||| ||||| || |||| Sbjct 2167 TCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTA 2108 Query 34965 CAAAGATCTGCATGAT 34980 ||||||| |||||||| Sbjct 2107 CAAAGATTTGCATGAT 2092 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| ||||| |||| ||| |||||||| ||||||||||| | Sbjct 2779 TTCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTG 2720 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| |||| || || || || ||||||| |||||||||||| | | Sbjct 2719 AAAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAG 2660 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | || || ||| ||| | |||| | ||| ||| || | Sbjct 2659 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAA 2600 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| || ||||| || || ||||| || || || ||||| ||||| Sbjct 2599 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 2551 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| || || ||||| ||||| || || || | | |||| Sbjct 2534 AGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCT 2475 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || || || ||||| || ||||| || | || | ||||| ||||| Sbjct 2474 TCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCT 2415 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||| || | | || | || || ||||| |||| ||| ||||| Sbjct 2414 TGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTT 2355 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| || || |||||||||||||||||| Sbjct 2354 TTACCCGTAAGAGTTTTTACAAAGATCTGCATG 2322 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| |||| |||| ||| || || |||||||||||||||| Sbjct 3007 TTCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCG 2948 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | || |||| ||| || || || || |||| ||||||||||| | | Sbjct 2947 AGAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAG 2888 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | || || ||| ||| | |||| | ||| ||| || | Sbjct 2887 GAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 2828 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| || ||||| || || || || || || || ||||| ||||| Sbjct 2827 CTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCAT 2779 >seq3043 Length=1629123 Score = 109 bits (120), Expect = 4e-19 Identities = 140/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 || || ||||| || || || | |||| |||| ||||| || || ||||||||||| Sbjct 1068043 TTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGATG 1067984 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 ||||| || || ||| |||| | ||||||||||| | || || ||||| || || Sbjct 1067983 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGAC--ATTCT 1067926 Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 || | ||| |||||| || || | ||| ||||| || ||||||||||| || || | Sbjct 1067925 CGATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGA 1067866 Query 34968 AGATCTGCATG 34978 ||||||||||| Sbjct 1067865 AGATCTGCATG 1067855 >seq3660 Length=1598725 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||| || ||||| || || | || | || || ||||| ||||| |||||| Sbjct 290915 TCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAG 290974 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||| ||| | || | || || ||||| | ||||| ||||| || Sbjct 290975 ATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGAC--AT 291032 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || |||| || ||||| || || | || ||||||||||| || ||||| || | Sbjct 291033 TCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGA 291092 Query 34965 CAAAGATCTGCAT 34977 ||||||||||||| Sbjct 291093 CAAAGATCTGCAT 291105 Score = 98.7 bits (108), Expect = 6e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | ||| || || || | || | ||| ||||||||||| || || || | Sbjct 291105 TTCCACCACGCAATCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAG 291164 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | | || |||| ||||| ||||||||||| ||||||| || ||||| || | | Sbjct 291165 ACAAAGTACGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTG 291224 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || ||||| || | || ||| ||| || || || || | ||| ||||| Sbjct 291225 GGATACCTTCCTTATCCTGGATCTTTGCTTTTAC--ATTCTCAATAGTGTCAGAAGCCTC 291282 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||| ||||||||||| ||||| | ||||| || || ||||||||| Sbjct 291283 AACTTCAAGAGTTATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCATG 291334 Score = 95.1 bits (104), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || ||||| || || | ||| | || || ||||| |||||||||||| Sbjct 290003 TCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAG 290062 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| | ||||| || | || | || |||||||| | ||||| |||||| || Sbjct 290063 ATCAACCTCTGCTGATCCGGTGGGATACCTTCCTTGTCCTGAATTTTAGCTTTGAC--AT 290120 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || |||| || || ||||| || | || || || || || ||||| || || | Sbjct 290121 TCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTGATAGTTTTACCAGTGAGAGTTTTGA 290180 Query 34965 CAAAGATCTGCAT 34977 |||| |||||||| Sbjct 290181 CAAAAATCTGCAT 290193 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || ||||| || || | ||| | || || ||||| |||||||||||| Sbjct 290231 TCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAG 290290 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| | |||||||| | || | || || ||||| | ||||| ||||| || Sbjct 290291 ATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGAC--AT 290348 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | || ||||| || || | || || |||||||| || || || || | Sbjct 290349 TCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGA 290408 Query 34965 CAAAGATCTGCAT 34977 | || || ||||| Sbjct 290409 CGAAAATTTGCAT 290421 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||| || ||||| || || | || | || || ||||| ||||| |||||| Sbjct 290687 TCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAG 290746 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||| ||| | || | || || ||||| | ||||| ||||| || Sbjct 290747 ATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGAC--AT 290804 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || |||| || ||||| || || | || ||||||||||| || || || || | Sbjct 290805 TCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGAGTTTTGA 290864 Query 34965 CAAAGATCTGCAT 34977 | || || ||||| Sbjct 290865 CGAAAATTTGCAT 290877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325675576855841