Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3806 172 4e-38 seq3660 132 4e-26 seq3840 82.4 6e-11 >seq3806 Length=402996 Score = 172 bits (190), Expect = 4e-38 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | ||| || ||||| ||||| ||||||||||||||||| |||||||| | Sbjct 2550 TCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGA 2491 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || ||||| ||||||||| | |||| | ||||||||||| || Sbjct 2490 GAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGG 2431 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||||||||| |||||| | ||| ||| |||| | ||||| ||| ||| | Sbjct 2430 AATTCCCTCTTTGTCTTG-AATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGA 2372 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| || || ||||| || || | ||||| ||||| |||||||| Sbjct 2371 CTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 161 bits (178), Expect = 8e-35 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | |||||| ||||||||||| || |||||||||||||||||||| |||| Sbjct 3006 TCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGA 2947 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | | || || | |||||| |||||| | ||||| | |||||| || || || Sbjct 2946 GAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGG 2887 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || ||||||||||| | || ||| || |||||| |||||||| ||| || Sbjct 2886 AATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 2827 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||||| || ||||| || || | ||||| || || || |||||| Sbjct 2826 TTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 152 bits (168), Expect = 4e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | |||||| |||| ||||||||||||||| || || |||||||| || | Sbjct 2778 TCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGA 2719 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | | ||| || | ||||| |||||| | ||||||| |||||| || || || Sbjct 2718 AAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGG 2659 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || ||||||||||| | || ||| || |||||| || ||||| ||| || Sbjct 2658 AATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAAC 2599 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||||| || ||||| || || | ||||| || || || |||||| Sbjct 2598 TTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| || | ||||||||| ||||| || || ||||| || || | | Sbjct 2321 CCTCCACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAA 2262 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| || |||||| | ||||| | ||||||||| || ||| Sbjct 2261 AGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 2202 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||| | || ||||||| | || | ||| |||||| |||||| Sbjct 2201 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACC 2142 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || ||||| ||||| | ||||| ||||| || ||||| Sbjct 2141 TCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | ||||| |||| ||||||||||||||||| |||||||| ||||| | Sbjct 3234 TCCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGA 3175 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || ||||||||||| || | |||| | || |||||||| || Sbjct 3174 AAGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGG 3115 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| ||||||||||| || | ||| || || |||| | || || ||| ||| || Sbjct 3114 AATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAAC 3055 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| || || || ||||| || || | ||||| || || || |||||| Sbjct 3054 TTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || |||||||||||||| ||||| ||||| | || || | ||| || Sbjct 3443 ACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCATCTTCC 3384 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||||||||| || | |||| | || |||||||| ||||| ||||||||||| || Sbjct 3383 AGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGG 3324 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | ||| || || |||| | || || ||| ||| ||||| || || || ||||| Sbjct 3323 ATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATTGTTTTA 3264 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || | ||||| || || || |||||| Sbjct 3263 CCGGTGAGAGTTTTCACGAAGATTTGCATT 3234 >seq3660 Length=1598725 Score = 132 bits (146), Expect = 4e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| || |||||||| | ||||||||||| ||||| || || || | || || || Sbjct 290888 AAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGG 290947 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 || || |||||||| ||||| | |||||||| |||||||| || || || || ||| Sbjct 290948 CCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCT 291007 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 |||||||| |||||| | |||||| | || | ||||| || || ||||| | || Sbjct 291008 TTGTCTTG-AATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGT 291066 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || | |||||| ||||| ||||||||| Sbjct 291067 GATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 291106 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| | |||||||| || ||||| || || || | || || || || || Sbjct 289985 ACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCTTCA 290044 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| || || | ||||| || ||||||||||| || ||||| || ||||| || Sbjct 290045 AGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCCTTGTCCTG- 290103 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||||||| | || | || || ||| ||| || || || || |||||||| Sbjct 290104 AATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTGATAGTTTT 290163 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| | ||||| ||||| |||||||| Sbjct 290164 ACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| | || ||||| ||||||||||| ||||| | || || ||| Sbjct 290434 ACGAAGGACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCAGAAAGTGTACGACC 290493 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || |||||||| || || | ||||| || ||||| ||||| || || || ||||| Sbjct 290494 GTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTT 290553 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | |||||| | || | |||||| || || ||||| | || | Sbjct 290554 GTCTTG-AATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGA 290612 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || || | ||||| || || || ||||| Sbjct 290613 TAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 118 bits (130), Expect = 8e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| || |||||||| | ||||||||||| ||||| || || || | || || || Sbjct 290660 AAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGG 290719 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 || || |||||||| ||||| | |||||||| |||||||| || || || || ||| Sbjct 290720 CCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCT 290779 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 |||||||| |||||| | |||||| | || | ||||| || || ||||| | || Sbjct 290780 TTGTCTTG-AATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGT 290838 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || | ||||| || || || ||||| Sbjct 290839 GATGGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | ||| | || || ||||| || |||||||| || ||||| || ||||| | Sbjct 291106 TCCACCACGCAATCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGA 291165 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || || ||| || || || || || ||| | ||||| | |||||||| || || Sbjct 291166 CAAAGTACGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGG 291225 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || || || | ||| ||| ||| | || | |||||||||| || || Sbjct 291226 GATACCTTCCTTATCCTGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAAC 291285 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||||||| || || || || || || || || || |||||||| Sbjct 291286 TTCAAGAGTTATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| | |||||||| || ||||| || || || | || || || || || Sbjct 290213 ACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCTTCA 290272 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| || || | ||||| || ||||| ||||| || || || ||||||||||| Sbjct 290273 AGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTTG- 290331 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | |||||| | || | |||||| || || ||||| | || ||||| || Sbjct 290332 AATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTT 290391 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | ||||| || || || ||||| Sbjct 290392 TCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 >seq3840 Length=147269 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| |||||||| || || | || ||||| ||||| |||||||| |||| Sbjct 133579 CCACCTCGCAAGCGCAGCACTAAGTGTAAAGTAGATTCCTTTTGGATGTTATAGTCCGAC 133638 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| || || ||| | ||||||||||||||||| |||||| Sbjct 133639 AAAGTTCTGCCATCTTCTAATTGCTTACCGGCAAAGATCAATCTTTGCTGATCTGGCGGA 133698 Query 29680 ATACC 29684 || || Sbjct 133699 ATTCC 133703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385198829006799