Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3743 239 3e-57 seq3105 183 2e-40 seq3431 118 8e-21 seq3653 95.1 9e-14 >seq3743 Length=1230821 Score = 239 bits (264), Expect = 3e-57 Identities = 688/1045 (66%), Gaps = 14/1045 (1%) Strand=Plus/Plus Query 281442 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 281501 |||||||||| || | ||| || || ||||| ||||| || || ||||| | || || | Sbjct 195695 TACCATTGGCGTCGATATCGAAAGTAACTTCGATTTGCGGTACACCTCTAGGTGCTGGAG 195754 Query 281502 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 281561 | || || || | |||| | || || | ||||||||||| || | || || | Sbjct 195755 GAATACCCGTCAGCTCAAATTTGCCAAGGATGTTATTATCTTTCGTCATCGCTCTCTCTC 195814 Query 281562 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 281621 ||||| | | || || || | | |||||| || || || || || || ||||| Sbjct 195815 CCTCGTAGACCTGAATGAGCACGCCCGGTTGATTGTCGGAGTATGTGGTGAACG-TCTGG 195873 Query 281622 ATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | | || | || || || ||||| || | || | ||||||||| || ||||| Sbjct 195874 GTCTGTTTCGTTGGTATCGTCGTGTTCCTCTTGATCAAGGTGGTCATAACGCCGCCAGCG 195933 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 || || | ||| | || | ||||| || || | || | | || ||| | || |||| Sbjct 195934 GTCTCAATACCCAATGATAATGGAGTAACGTCCAACAGAAGTAGATCTTGGACTTCTTCA 195993 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 | | || ||||| || || |||| || |||||||| |||||||| || || Sbjct 195994 GACTTGTCGCCGTGCAGAATGGCCGCCTGAACTGCTGCACCATAAGCAACAGCCTCGTCC 196053 Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860 ||||||| | || ||| |||| || ||||| || |||| | ||| |||| ||| | Sbjct 196054 GGATTAATGGATTTATTCAGTTCCTTGCCATTAAAGAAATCTTGAAGTAGTT-TCTGAAT 196112 Query 281861 TTA-GGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 281919 || || || | | || || || |||| || || || || || | |||||||| Sbjct 196113 TTTTGGTATCCTGGTGGAGCCACCGACTAGAACGATGCTGTGAACTTGAGCTTTATCCAT 196172 Query 281920 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACA 281979 || | ||| | | | || || |||||||| ||| |||||||| || | || Sbjct 196173 CTTCGCATCTCTAAGAGCCTTCTCCACGGGTTCGAGAGTGCTTCTAAACAGATCAGCGCA 196232 Query 281980 AAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAA 282037 || || ||||| | |||||||| || || | || || ||||| || || || || Sbjct 196233 GAGCTCCTCGAACCTGGCTCTAGT--GACCGATGTATAGAAGTCAATCCCCTCAAATAAT 196290 Query 282038 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 282097 ||||| | ||||| | | || ||||| || | | | || || | ||||| Sbjct 196291 GAATCGATCTCAATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCACAA 196350 Query 282098 GCTGTCCTTAGTCTTCGTAAGGCTTT-TGCTGATTGATTCAAATCTGTTTTATATTTTCT 282156 || |||||||| | || | ||| | | | | || | || |||| | || ||||| || Sbjct 196351 GCAGTCCTTAGGCGTCTCAGAGCTCTCTTGTTACTGCT-CAGATCTTTCTTGTATTTCCT 196409 Query 282157 CTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTCACCTCCCAAT 282214 ||| || |||| ||| | ||| | || | || || |||||||| || || || | Sbjct 196410 CTTAAATTCTTGCACAAA--ATGGTTCACCATTCGGTTGTCAAAATCCTCGCCACCAAGA 196467 Query 282215 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTA 282274 | || | || | ||| | | | || | ||| | ||||| || | | || || | Sbjct 196468 TGCGTGTCGCCAGCCGTGGATTTCACCTCGAAGATACCATCCTCGATCGTCAGAATCGAC 196527 Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 || ||| || |||||||||| ||||| || || ||||| |||| | ||| Sbjct 196528 ACGTCAAAAGTACCACCACCCAAGTCAAAGATCAGAACATTTTTTTCACCTGCAGCCTTT 196587 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 ||||| ||||||||||| | || || || || ||||| || || ||||| | ||| || Sbjct 196588 TTATCGAGACCATACGCTATCGCGGCGGCTGTGGGTTCGTTTATTATTCTGAGAACGTTC 196647 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | |||||||| || ||||| || || ||||||||||| || || || ||||| || Sbjct 196648 AAGCCAGCAATAGCGCCGGCATCCTTTGTCGCTTGTCTTTGAGAGTCATTGAAATAAGCC 196707 Query 282455 GGAACAGTAATAACGGCATCTGTTA 282479 || ||||| || ||||||| ||||| Sbjct 196708 GGCACAGTGATGACGGCATTTGTTA 196732 >seq3105 Length=3863317 Score = 183 bits (202), Expect = 2e-40 Identities = 697/1077 (65%), Gaps = 28/1077 (3%) Strand=Plus/Minus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || ||||| || |||| | ||||| || || || || ||||| | || || || || Sbjct 1684970 GTAGATTTGTCCACGGCGGAAACATTGAGGATGCCGTTCGCATCGATGTCGAACGTCACC 1684911 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTA-AATGTTCCCAG 281529 ||||| ||||| || || | | || ||||| || || | || || ||| | ||||| Sbjct 1684910 TCAATCTGAGGAACTCCACGAGGTGCTGGTGGAATACCG-CTAAGTTCGAATTTACCCAG 1684852 Query 281530 ATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGT 281589 ||||||||| || || | || ||||||||| | | || || || ||| Sbjct 1684851 TAAATTATTATCCTTGGTCATGGCGCGCTCACCCTCGTACACCTGAATCAACACGCCAGG 1684792 Query 281590 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT 281649 |||||| || | ||||||||||| | | | || || || || || ||||| Sbjct 1684791 TTGATTGTCGGCGTAAGTTGTAAAGGTTTGAGTCTGCTTCGTCGGGATGGTGGTATTTCT 1684732 Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709 | ||| | ||||| | |||||| || || || | ||| ||||| || |||||||| Sbjct 1684731 CTTAATGAGCGCAGTCATGACACCACCGGCAGTCTCAATACCCAGAGAGAGCGGAGTGAC 1684672 Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAAC----AAGAATAGCTG 281765 ||| | | | | | ||| | | | || | || | || | |||| |||| | Sbjct 1684671 ATCGAGCAAAAGCAAGTCTTGCACCT---CCTCGGATTTATCACCGTGCAAGA-TAGCCG 1684616 Query 281766 CTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTT 281825 | || | || || |||||||| ||||| || |||||||| | || || || || | || Sbjct 1684615 CCTGTACTGCCGCGCCATATGCCACAGCCTCGTCAGGATTGATAGATTTGTTAAGCTCTT 1684556 Query 281826 TACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCA 281884 | ||||||||||| | ||| | || || | | ||| ||||| || | || ||||| Sbjct 1684555 TGCCATTGAAAAAGTCTTGCAGGAGCTTCT-GAATCTTGGGAATTCGCGTAGAGCCTCCG 1684497 Query 281885 ACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCA 281944 ||||| || || || || | || | ||| |||| ||| | || | |||||| Sbjct 1684496 ACTAAAACGATATCGTGGATTTGGGCTTTGTCCATTTTGGCGTCGCGCAGCGACTTTTCA 1684437 Query 281945 ACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 282004 |||||||||||| | | | || | || | || ||||| ||||| ||||| || Sbjct 1684436 ACGGGTTCAAGAGTACCGCGGAAGAGATCGGCGCAGAGTTCCTCGAAACGAGCTCGGGT- 1684378 Query 282005 AGAGTGACAT-TA-TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG 282062 || || | || |||| ||||| || |||| ||||| | || || | | || | Sbjct 1684377 -GATGGAAGTGTAGAAATCGATTCCCTCATACAACGAATCGATCTCGATGCTGGCCTGGG 1684319 Query 282063 TCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG---G 282119 | || || || || | ||| || |||||||| || || || | || | || ||| | Sbjct 1684318 TGGAGGATGACAGGGTACGCTTGGCACGTTCGCAAGCCGTGCGAAGACGACG-AAGTGCG 1684260 Query 282120 CTTTTGCT-GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCAT 282178 | |||| | || | ||||||| | || ||||| | ||||| |||| || | Sbjct 1684259 CGTTTGTTCGA---AGTCAAATCCTTCTTGTATTTACGTTTGAATTCTTGCACGAAGTGA 1684203 Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 | || | || ||||| || || || || ||||| | ||||| ||| | ||| | | Sbjct 1684202 TTGACCATGCGGTTATCGAAGTCCTCGCCACCCAAATGAGTATCTCCAGCCGTGGACTTG 1684143 Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 || | ||| | |||||||| | | || | | ||||| || |||||||| | | Sbjct 1684142 ACCTCGAAGATACCATCTTCGATGGTCAGGATGGACACATCGAAAGTGCCACCACCGAGA 1684083 Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAG 282356 ||||| ||||| || || | || ||| ||||| || ||||| || |||| | Sbjct 1684082 TCAAAGATAAGGACGTT--TCGCTCGCCGGTGGCCTTTTTGTCGAGACCGTATGCAATCG 1684025 Query 282357 CAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCAT 282416 | || || || || || || ||||| | ||| || || | || | || | || || | Sbjct 1684024 CGGCGGCGGTGGGCTCGTTGATAATACGCAATACGTTTAAGCCCGAGATGGTACCAGCGT 1683965 Query 282417 CTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 | || || || || | || || ||||| || || || || || || || || |||| Sbjct 1683964 CCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTGATCACAGCAT 1683908 Score = 86.0 bits (94), Expect = 5e-11 Identities = 168/245 (69%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 282187 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 282246 ||| | ||| |||||||| ||||| || | ||| | || || || |||| || Sbjct 1736741 ACGCTGATCGAAATCTTCGCCTCCTAAATGAGTGTCGCCATTAGTGGCAACGACTTCAAA 1736682 Query 282247 AAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAAT 282306 | || | |||| || | | | | || ||| ||| || || |||| ||||| | Sbjct 1736681 CACACCGTTATCAATAGTGAGCAAACTGACGTCAAAGGTGCCGCCGCCCAGGTCAAACAC 1736622 Query 282307 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 282366 ||||| || | || ||||| ||||||| | ||| || |||| ||||| ||||| Sbjct 1736621 CAGTACGTTTTTCTCGCCGTCTT---TTTTATCCAAACCGTATGCAATTGCAGCGGCAGT 1736565 Query 282367 TGGTTCATTAATAATTCTCAAAAC-ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425 || || || |||||||||| || | ||| |||| |||| |||| ||||||||||||| Sbjct 1736564 CGGCTCGTTGATAATTCTCATTACGACCAAG-CCAGAAATTGTTCCGGCATCTTTAGTGG 1736506 Query 282426 CTTGT 282430 | ||| Sbjct 1736505 CCTGT 1736501 >seq3431 Length=3392949 Score = 118 bits (130), Expect = 8e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 ||| |||| | |||||| | ||||| |||| ||||| || |||||||||||||| | Sbjct 1375003 TTTATCTTCTTGTTTATCCATTCCATAAGCAAGTGCAGCTGCGGTTGGTTCATTAATTAC 1375062 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | | |||||| | |||||||| || ||||| || || ||||||| ||| ||||| Sbjct 1375063 ACGAAGAACATTCAATCCAGCAATCTGACCAGCATCCTTTGTTGCTTGTCGTTGAGAATC 1375122 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481 |||||||| || || ||||||||||| |||| | ||||| Sbjct 1375123 ATTAAAATACGCTGGTACAGTAATAACAGCATTTTTTACT 1375162 Score = 107 bits (118), Expect = 1e-17 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 || || ||||| || ||||| |||||||||||||||| |||||||| || || ||| Sbjct 1375025 CCATAAGCAAGTGCAGCTGCGGTTGGTTCATTAATTACACGAAGAACATTCAATCCAGCA 1375084 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || | | ||| ||| |||||||||| || | ||||||||||| |||||||||||| Sbjct 1375085 ATCTGACCAGCATCCTTTGTTGCTTGTCGTTGAGAATCATTAAAATACGCTGGTACAGTA 1375144 Query 86239 ATAACTGCTTTATT 86252 ||||| || || || Sbjct 1375145 ATAACAGCATTTTT 1375158 >seq3653 Length=922873 Score = 95.1 bits (104), Expect = 9e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 432280 GATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGT 432339 || ||| ||| || ||||| | ||| | |||||| ||||||| || ||||| || | | Sbjct 658679 GACTGAAAGGAAAGGAAGGCAGGATTCGTGGAAATCTGATGGGTAAACGTGTGGACTTCT 658620 Query 432340 CTGCACGTACAGTTATTACTTCTGATCCTAATATTGC-TCTCAATGAAGTTGGTGTTCCT 432398 |||| ||||| ||||| ||| ||||||||||| |||| | | || |||| || || || Sbjct 658619 CTGCGCGTACTGTTATCACTCCTGATCCTAAT-TTGCGTATTGATCAAGTAGGCGTACCG 658561 Query 432399 CTCATTATTGCGAAAAATCTTACTTT 432424 | || ||| ||| ||||||| || || Sbjct 658560 CGCAGTATAGCGCAAAATCTGACATT 658535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740417373436614