Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3660 181 2e-40 seq3806 176 9e-39 seq3043 100 6e-16 >seq3660 Length=1598725 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||||| ||||| || |||| || ||||||||||| ||||| || |||| Sbjct 290877 TACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAG 290936 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||||| |||||||||||||| ||||| | ||| || |||||||| | Sbjct 290937 AAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGG 290996 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || |||||||| || || || ||||| || ||||| || | || | Sbjct 290997 GGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAA 291056 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||||| || || ||||| ||||||| || || ||||| ||||||||| Sbjct 291057 CTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 291106 Score = 176 bits (194), Expect = 9e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 |||||||| || ||||| ||||| ||||| ||||| |||||||| | | | | || ||| Sbjct 291122 AGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCCATCT 291181 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || || ||||| |||||||| | | || ||||| || || || ||||||||||| Sbjct 291182 TCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCCTTATCC 291241 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||||||||||||||| ||||| || ||| || || ||||| | |||||| ||| Sbjct 291242 TGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTTATGGTC 291301 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| ||||| || || |||||||| Sbjct 291302 TTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||||| ||||| || |||| || ||||||||||| ||||| || |||| Sbjct 290649 TACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAG 290708 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||||| |||||||||||||| ||||| | ||| || |||||||| | Sbjct 290709 AAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGG 290768 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || |||||||| || || || ||||| || ||||| || | || | Sbjct 290769 GGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAA 290828 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || ||||| ||||||| || || || || || ||||| Sbjct 290829 CTTCCAACGTGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | ||| || |||||||||||||| |||||||| || ||| Sbjct 289739 CCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGAT 289798 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || || ||||| || || || || || || |||||||||||||| ||||| Sbjct 289799 AAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGA 289858 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||| ||||| || || || || ||||| ||||| || || || || Sbjct 289859 ATGCCTTCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACC 289918 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || || || || | || || ||||| |||||||| Sbjct 289919 TCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 || ||| || |||| || ||||| ||||| ||||| || ||||| || | | ||||| Sbjct 289981 CAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTC 290040 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 ||| ||||||||||| || ||||| | || || ||||| || || || |||||||| || Sbjct 290041 TTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCCTTGTC 290100 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 ||||| || ||||| ||||| || |||||||| || ||| || |||| || || || Sbjct 290101 CTGAATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTGATAGT 290160 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | || || ||||| |||||||| Sbjct 290161 TTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | |||| |||||||| || || || || ||||||| Sbjct 290421 TACCACCACGTAGACGAAGGACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCAG 290480 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||||||| ||||||||||| || ||||| | || || || || || | Sbjct 290481 AAAGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTG 290540 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || |||||||| || || || ||||| ||||| || || | || | Sbjct 290541 GGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAA 290600 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || ||||| ||||||| || || || || || ||||| Sbjct 290601 CTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 136 bits (150), Expect = 8e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 || ||| || |||| || ||||| ||||| ||||| || ||||| || | | ||||| Sbjct 290209 CAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTC 290268 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 ||| ||||||||||| || ||||| | || || || || || || |||||||| || || Sbjct 290269 TTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTC 290328 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 |||||| || || || ||||| ||||| || || | || |||||||| || || || Sbjct 290329 TTGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGT 290388 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| ||||||| || || || || || ||||| Sbjct 290389 CTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 >seq3806 Length=402996 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | ||| ||||| ||||| || || |||||||| || |||||||||||||| Sbjct 2549 CCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 2490 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| |||| || ||||| ||||| || |||||||| || || | || ||||| || || Sbjct 2489 AGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 2430 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| || || |||||||| || ||||| ||||||||||| || || || ||| ||| Sbjct 2429 ATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGACT 2370 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || || || | || |||||||| |||||||| Sbjct 2369 TCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||||||||| | || || |||||||| ||||| || || || ||||| Sbjct 2321 CCTCCACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAA 2262 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| |||| || || |||| ||| |||||||||||||| | | ||| ||||||||||| Sbjct 2261 AGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 2202 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || ||||| ||||| ||||| ||||| || || |||||| || |||||| Sbjct 2201 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACC 2142 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 || | || || || || || || | || |||||||| || ||||| || Sbjct 2141 TCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCATGAT 2092 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | ||||||||| || || || ||||||||||| || || ||||| || || Sbjct 3005 CCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAG 2946 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | ||||||||||| | |||||| |||||||| || | | ||| || || ||||| Sbjct 2945 AGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGA 2886 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || ||||| ||||| |||||||| ||||| || || ||| | ||| ||| Sbjct 2885 ATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACT 2826 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | ||| || || || || || | || || || || || |||||| Sbjct 2825 TCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | ||||||||| | || || || ||||| ||||| || ||||| || || Sbjct 2777 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGAA 2718 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | ||||| ||||| | ||||| ||||||||||| | || ||| || || ||||| Sbjct 2717 AGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGA 2658 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || ||||| ||||| |||||||| ||||| || |||||| | ||| ||| Sbjct 2657 ATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAACT 2598 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | ||| || || || || || | || || || || || |||||| Sbjct 2597 TCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | ||||| ||| | ||| || || ||||||||||| || || |||||||| Sbjct 3233 CCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAA 3174 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| |||| || |||||||||||||| || || || || || | |||||||| || || Sbjct 3173 AGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGA 3114 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| || || || || || || || || || ||||| || ||||| || ||| ||| Sbjct 3113 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACT 3054 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | || || || || || || | || || || || || |||||| Sbjct 3053 TCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 >seq3043 Length=1629123 Score = 100 bits (110), Expect = 6e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 |||| || || || ||||| || | | | | || || || || ||||| || || |||| Sbjct 1068045 CTTTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 1067986 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | |||| ||||||||||| || ||||| ||||| || || ||||| || || ||||| | Sbjct 1067985 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCT 1067926 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | || |||||| | ||||| || | || || || || || || | || || || | Sbjct 1067925 CGATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGA 1067866 Query 82801 ATATCTGCAT 82810 | |||||||| Sbjct 1067865 AGATCTGCAT 1067856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981772616850921