Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3660 98.7 1e-15 >seq3660 Length=1598725 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| || ||||| |||||||| || | ||| ||| ||| || | Sbjct 290216 AAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAA--GTGTACGCCCGTCTTCAA 290273 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | || ||||||||| || ||||| ||||| ||||| ||| Sbjct 290274 GTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCT-TGA 290332 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||||| ||||| | | ||| || || | |||| || || Sbjct 290333 ATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTTT 290392 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||||||||| |||||||| ||||| Sbjct 290393 CCTGTCAGAGTTTTGACGAAAATTTGCAT 290421 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| |||||||| |||||||| || | ||| ||| ||| || | Sbjct 290672 AAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGT--ACGGCCGTCTTCAA 290729 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | | |||||| || || ||||| ||||| ||||| ||| Sbjct 290730 GTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCT-TGA 290788 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | |||||| | | ||| || || | |||| ||| || Sbjct 290789 ATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTT 290848 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||||||||| |||||||| ||||| Sbjct 290849 CCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| || || || || || |||||||| | ||| |||| ||| || || Sbjct 290446 ATGCAAGGTAGATTCCTTTTGAATGTTGTAATCAGAAA--GTGTACGACCGTCTTCAAGT 290503 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || ||| | || | || ||||||||| || ||||| ||||| ||||| ||| Sbjct 290504 TGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCT-TGAAT 290562 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || |||| | ||||| ||||| | | ||| || || | |||| || || || Sbjct 290563 TTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTTTCC 290622 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||||||| |||||||| ||||| Sbjct 290623 TGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||| || ||||| ||||||||||| || || | | | || || || Sbjct 291128 AAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCCA-TCTTCCAG 291186 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || | |||||||| || || ||||| |||||||| || ||| Sbjct 291187 CTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCCTTATCCTGGAT 291246 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| || | | ||||| ||||| | | ||| || || | || | ||| || || Sbjct 291247 CTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTTATGGTCTTCCC 291306 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 |||| || || |||||||||||||||| Sbjct 291307 CGTCAATGTCTTCACGAAAATCTGCATGG 291335 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||||||| |||| || | || || |||||||| |||||||| || Sbjct 289811 TCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTA 289870 Query 133566 TCGGTGATCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || ||| ||| | ||| | | || | |||||| | | ||| || || | || | Sbjct 289871 TC-CTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACCTCCAGCGTAAT 289929 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| || ||||||||||| Sbjct 289930 AGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| || ||||| |||||||| || | ||| ||| ||| || | Sbjct 289988 AAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAA--GTGTACGCCCGTCTTCAA 290045 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | || |||||| || || ||||| ||||||||||| ||| Sbjct 290046 GTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCCTTGTC-CTGA 290104 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | ||| || | | || || || | |||| ||||| Sbjct 290105 ATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTGATAGTTTTA 290164 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || |||||||| || ||||||||||| Sbjct 290165 CCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483394580464360