Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3806 120 2e-22 seq3660 109 4e-19 >seq3806 Length=402996 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| | ||||| || || ||| |||||||| || || ||||| ||| Sbjct 2549 CCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 2490 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | ||| || || |||||||||| |||||||||||| | || Sbjct 2489 AGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 2430 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || |||||||| |||||| ||||| ||| ||| |||||| | ||| || Sbjct 2429 ATTCCCTCTTTGTCTTGAATTTTGGCTTTCA-CATTTTCAATGGTGTCCGAAGCTTCGAC 2371 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || |||||||| || | |||||||||||||||||||| Sbjct 2370 TTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| | |||||||| || || |||||||| ||||| || || ||| Sbjct 3005 CCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAG 2946 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | |||| ||||||||||| || |||||||||||||| ||||| || | || Sbjct 2945 AGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGA 2886 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || | || || | || | ||||| | ||| || Sbjct 2885 ATGCCTTCTTTGTCTTGGATCTT-AGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 2827 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| |||||||| || | ||||| || ||||| ||||| Sbjct 2826 TTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCAT 2779 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 ||||| || || || || ||| |||||||| ||||||||||| || || || | | Sbjct 3449 CGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCA 3390 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||| |||||| ||||| ||||||| |||||| ||||| | || | || |||||| Sbjct 3389 TCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTG 3330 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||||| ||| || | || | ||| || | ||| || || | || || Sbjct 3329 TCCTGGATTTTGGCCTTC-ACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAAT 3271 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||||||| || | ||||| || ||||| ||||| Sbjct 3270 TGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3235 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| || || || || | | || || ||||| ||||| ||||| Sbjct 2285 TCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAG 2226 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||||||| ||||||||| | || | |||||||||||| || || | || |||| Sbjct 2225 ATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTT-AGCTTTGACATT 2167 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | || || | ||| || |||| || || ||||| || || | |||||||| Sbjct 2166 CTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTAC 2107 Query 33738 AAAGATCTGCAT 33749 |||||| ||||| Sbjct 2106 AAAGATTTGCAT 2095 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| || |||| || || ||| ||||| || ||||||||||| || Sbjct 3233 CCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAA 3174 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | |||||| ||||| ||||||| |||||| ||||| | || Sbjct 3173 AGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGA 3114 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||| ||| || | || | ||| || | ||| || Sbjct 3113 ATTCCCTCTTTGTCCTGGATTTTGGCCTTC-ACGTTTTCGATGGTATCTGAAGCTTCAAC 3055 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || |||||||| || | ||||| || ||||| ||||| Sbjct 3054 TTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3007 >seq3660 Length=1598725 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || |||||||| | ||| || || || || ||||| || || ||||| || |||| Sbjct 289982 AAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCT 290041 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | |||||||||||| || ||||| | ||||||||| | || | |||||| ||||| Sbjct 290042 TCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCCTTGTCC 290101 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 |||||| | || |||| || | || || | ||| || || | |||||| || Sbjct 290102 TGAATTTT-AGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTGATAGT 290160 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||||| || | ||||| ||||| ||||||||| Sbjct 290161 TTTACCAGTGAGAGTTTTGACAAAAATCTGCATA 290194 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||||| | |||||||| | ||| ||||| || || ||||| || || Sbjct 290878 ACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGA 290937 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| || | ||||||||| || || ||||| | |||||||||| | || Sbjct 290938 AAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGG 290997 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| | | |||| || | ||||| | || | Sbjct 290998 GATTCCTTCTTTGTCTTGAATTTT-GGCCTTGACATTCTCGATCGTGTCTGACGCCTCAA 291056 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||| || || ||||| | ||||| |||||||||||||| Sbjct 291057 CTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 291105 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||||| | |||||||| | ||| ||||| || || ||||| || || Sbjct 290650 ACCACCACGTAAACGGAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGA 290709 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| || | ||||||||| || || ||||| | |||||||||| | || Sbjct 290710 AAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGG 290769 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| | | |||| || | ||||| | || | Sbjct 290770 GATTCCTTCTTTGTCTTGAATTTT-GGCCTTGACATTCTCGATCGTGTCTGACGCCTCAA 290828 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||| || || ||||| | ||||| || || || |||||| Sbjct 290829 CTTCCAACGTGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATTTGCATA 290878 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| ||||||||||| || ||||| || |||| || | |||||||||||| || Sbjct 290459 TCCTTTTGAATGTTGTAATCAGAAAGTGTACGACCGTCTTCAAGTTGTTTTCCGGCGAAG 290518 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| | |||||| || | || | ||||||||||| |||||| | | |||| Sbjct 290519 ATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTTGAATTTT-GGCCTTGACATT 290577 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||||| | || || || | ||||| || || ||||| | ||||| || Sbjct 290578 CTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTTTCCTGTCAGAGTTTTGAC 290637 Query 33738 AAAGATCTGCATA 33750 || || |||||| Sbjct 290638 GAAAATTTGCATA 290650 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | ||| | | || ||||| |||||| || || || || |||||||| || Sbjct 291107 CCACCACGCAATCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGAC 291166 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || ||| | || |||| || ||||||||||| ||||||||||||||||| | || Sbjct 291167 AAAGTACGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGG 291226 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| || || || || || || |||| || | ||||| | || || Sbjct 291227 ATACCTTCCTTATCCTGGATCTT-TGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAAC 291285 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 |||| || || || || || || || || || || || |||||||| || Sbjct 291286 TTCAAGAGTTATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCATGGT 291336 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || |||||||| | ||| || || || || ||||| || || ||||| || |||| Sbjct 290210 AAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCT 290269 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | |||||||||||| || ||||| | |||||| || | || | ||||||||||| Sbjct 290270 TCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCT 290329 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 |||||| | | |||| || | ||||| | || || || | ||||| || Sbjct 290330 TGAATTTT-GGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGT 290388 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || ||||| | ||||| || || || |||||| Sbjct 290389 CTTTCCTGTCAGAGTTTTGACGAAAATTTGCATA 290422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328686617618880