Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4330 96.9 3e-15 >seq4330 Length=3992391 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||||||||||||||| || |||| || || || ||||| |||||||| ||||| Sbjct 1171687 ACATGAGCGATCATGTAAGTCAGCAAAGAATATGACGCTATGTTAAACGGCACTCCTAAA 1171746 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||||||| | || |||||| || || ||||| || || || ||||| ||| Sbjct 1171747 CCCATGTCTGCGCTTCTTTGATAAAGTTGCGTGGACAATTCTCCGTTATTTACGTAAAAT 1171806 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || | ||||| ||||| || | |||||| || | ||| |||| ||||| || Sbjct 1171807 TGTACCAAAGTGTGACACGGCGGCAATGCCATCTTTGGAATATCAATCGGATTCCAGGCT 1171866 Query 6797 CACATCACGATCCTTCTGTCATCAGG 6822 | || | || | |||||| ||||| Sbjct 1171867 GATATTATAATACGTCTGTCCTCAGG 1171892 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 ||||| |||||| | || | || | || ||||| |||| ||| | || |||||| Sbjct 1171892 CCTGAGGACAGACGTATTATAATATCAGCCTGGAATCCGATTGATATTCCAAAGATGGCA 1171833 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642 | || ||||| ||||| | ||||| ||||| || || || ||||| || Sbjct 1171832 TTGCCGCCGTGTCACACTTTGGTACAATTTTACGTAAATAACGGAGAATTGTCCACGCAA 1171773 Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 || |||||| || | ||||||||| ||||| |||||||| ||||| || || || Sbjct 1171772 CTTTATCAAAGAAGCGCAGACATGGGTTTAGGAGTGCCGTTTAACATAGCGTCATATTCT 1171713 Query 34703 CTGCTCACGTACATGATCGCTCATGT 34728 |||| || ||||||||||||||||| Sbjct 1171712 TTGCTGACTTACATGATCGCTCATGT 1171687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448238087368080