Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3806 149 1e-30 seq3672 138 3e-27 seq3660 134 3e-26 seq3799 96.9 8e-15 seq3992 91.5 4e-13 seq3473 89.7 1e-12 seq3893 87.8 4e-12 seq3525 84.2 5e-11 >seq3806 Length=402996 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| | || | |||||| |||||||||||||||| |||||||| | | |||| Sbjct 3455 CGAAGTCGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTT 3396 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| || || || || ||||| || || || ||||| || || ||||| || Sbjct 3395 CTGCCATCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCC 3336 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || ||||| ||||| || |||||| ||||||||| ||||| | ||| || || | Sbjct 3335 TCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGG 3276 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || || || | |||||| | ||| | ||||||| Sbjct 3275 GTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3234 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || ||||| || ||||||||||| || | |||||||| | | |||| Sbjct 3227 CGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTT 3168 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| || || || ||||| || || || ||||| || || ||||| || Sbjct 3167 CTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCC 3108 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || ||||| ||||| || |||||| ||||||||| ||||| | ||| || || | Sbjct 3107 TCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGG 3048 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || || || | |||||| | ||| | ||||||| Sbjct 3047 GTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 Score = 136 bits (150), Expect = 9e-27 Identities = 165/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | ||| || |||||||||||||| | ||| ||||| | | |||| Sbjct 2543 CGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTT 2484 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| || ||||| ||||| || || || || || || || || ||||| || Sbjct 2483 CTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCC 2424 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || |||||||| || ||| || |||||| ||| |||||||| || | ||| || || | Sbjct 2423 TCTTTGTCTTGAAT-TTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGACTTCAAG 2365 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| | |||||||| || | ||||| Sbjct 2364 GGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||| ||||| || || || ||||| || |||| ||||| || | | ||| Sbjct 2316 ACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGT 2257 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||| |||| ||||| ||||| ||||| | ||||| || || || |||||||| Sbjct 2256 TCTGCCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACC 2197 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| |||||||||||||| || ||| ||||| || || || | ||| || || | Sbjct 2196 TTCTTTGTCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACCTCAAG 2137 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || || | |||||||| || | |||||| Sbjct 2136 GGTAATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||| || || || || |||||||| || |||| || || || | | || Sbjct 2771 CGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGAAAGTGTC 2712 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| | ||| || ||||| ||||| | |||||| ||||| || ||||| ||| Sbjct 2711 CTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGAATGCCT 2652 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || |||||||||||||| || || ||| || || || |||| ||| || || | Sbjct 2651 TCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGA 2592 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || || || || | |||||| | ||| | ||||||| Sbjct 2591 GTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||| || | || || || ||||||||||| | || || || | | || Sbjct 2999 CGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAGAGTGTC 2940 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || || ||||| | || || ||||| || || | ||||| ||||| || ||||| ||| Sbjct 2939 CTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGAATGCCT 2880 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || |||||||||||||| || || ||| || ||||| |||| ||| || || | Sbjct 2879 TCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGA 2820 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || || || || | |||||| | ||| | ||||||| Sbjct 2819 GTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 >seq3672 Length=173346 Score = 138 bits (152), Expect = 3e-27 Identities = 100/116 (86%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || ||||||||||| |||||||| || ||||| || || ||||||||||| |||||||| Sbjct 103638 AAGATTTGACCATCGGTAATAGAAATGACATTGGTGGGAATATAAGCAGACACATCACCG 103579 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586 ||||||||||||| ||||||||| || || | |||||||||||| ||||||| ||| Sbjct 103578 GCTTGTGTTTCGATAACAGGTAAAGCAGTCAATGATCCACCACCTAAATTTTCATT 103523 >seq3660 Length=1598725 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||||| || |||||||| || || |||||||| || | ||| || || | ||||| | Sbjct 289747 AAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGATAAAGTCCG 289806 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||| ||||||||||| || ||||| || |||| |||||| ||||| ||||| ||||| Sbjct 289807 TCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTC 289866 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 || || || || || |||||| |||||| |||||||| | || || || | ||| Sbjct 289867 TTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACCTCCAGCGT 289926 Query 225675 GATCGTCTTGCCCGTCAAAGTTTT 225698 || || || || || | |||||| Sbjct 289927 AATAGTTTTACCAGTGAGAGTTTT 289950 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||| || || | |||||||||||||| || || | ||||||||| | |||||| Sbjct 291112 ACGCAATCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGT 291171 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| || || ||||| | || || || || || || ||||| Sbjct 291172 ACGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACC 291231 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || ||||||||| || ||| || || ||||| || | || || || | Sbjct 291232 TTCCTTATCCTGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAG 291291 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| |||||||| || || | ||| | ||||| Sbjct 291292 AGTTATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||||||||| || | |||||| || | | || | || ||||| || || || ||| Sbjct 290681 GTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCA 290740 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | || || || || || || || ||||| |||||||| || || ||| Sbjct 290741 GCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTG 290800 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| ||||| |||||||| | || || || |||||||| ||||| || |||| |||| Sbjct 290801 ACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGAGTT 290860 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 290861 TTGACGAAAATTTGCAT 290877 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||||||||| || | |||||| || | | || | || ||||| || || || ||| Sbjct 290909 GTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCA 290968 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | || || || || || || || ||||| |||||||| || || ||| Sbjct 290969 GCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTG 291028 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| ||||| |||||||| | || || || |||||||| ||||| || |||| ||| Sbjct 291029 ACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAGGGTT 291088 Query 225697 TTTATGAACACTTGCATT 225714 || | || | |||||| Sbjct 291089 TTGACAAAGATCTGCATT 291106 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| |||| || | || | |||||||| || || | |||||| || | | || Sbjct 289973 CGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTA 290032 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||| ||||| || || || || |||||||| | | || || || || || |||||| Sbjct 290033 CGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGGATACCT 290092 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || || ||| || || ||| ||||| || ||||| | ||| || || | Sbjct 290093 TCCTTGTCCTGAAT-TTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGACCTCCAG 290151 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 |||||| || || || || | |||||| Sbjct 290152 CGTGATAGTTTTACCAGTGAGAGTTTT 290178 >seq3799 Length=136602 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| |||| ||||||||||| |||||||||| ||| | ||||| |||||| | || || Sbjct 75527 TTCGGGATATCCAAAAAATCAAAATAAATGTTTATATAAAATAGGGTCGCCTTCTCCGGA 75468 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||||||||||||| ||||| ||||||| || ||||||| Sbjct 75467 TGGATCAAAAAAGGAGGTATTTAAATTTCGGTCTGTTAAAA 75427 >seq3992 Length=40483 Score = 91.5 bits (100), Expect = 4e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| || |||||||||||||| ||||| ||||| | | ||||||||||||||| | Sbjct 31580 ATACTTCTGGGTGACCAAAAAATCAAAATAAGTGTTGGAATAAGATAGGATCGCCTCCTC 31639 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 | || |||||||| || ||||| ||||| | ||| |||| || Sbjct 31640 CCGAGGGATCAAAGAATGAGGTATTTAAATTGCGATCTGTTAGAA 31684 >seq3473 Length=64820 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| | ||| ||| |||||||||||||||| | |||||| || || ||||| || Sbjct 16453 TTCAGGATGGCTAAAGAATTAGAATAAATGTTGATATAAGATAGGGTCTCCGCCGCCGGA 16512 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 |||||| || || || || ||||||| ||| ||||| Sbjct 16513 TGGATCGAAGAAAGAGGTGTTTAAATTTCGATCTGTTAA 16551 >seq3893 Length=93932 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||| |||||||| ||||||||||| ||||| || | |||||| || || |||||||| Sbjct 80164 TTCAGAGTGACCAAAGAATCAGAATAAGTGTTGGTATAAGATAGGGTCTCCGCCGCCTGA 80223 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 |||||| || || ||| || | |||| ||| ||||||| Sbjct 80224 TGGATCGAAGAAAGAAGTGTTTAGGTTTCGATCTGTTAAAA 80264 >seq3525 Length=203603 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| ||||| |||||||||||||||||||| | ||||| || | ||||| || Sbjct 2770 TTCAGGATGGCCAAAGAATCAGAATAAATGTTGATATAAAATAGGGTCTTCACCGCCGGA 2711 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||| || || || | ||| |||||| ||| ||||||| Sbjct 2710 TGGGTCGAAGAAAGAGGGATTTAAATTTTGATCTGTTAAAA 2670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192464903091266