Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq3806 84.2 2e-11 >seq3806 Length=402996 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||| | || ||||||||||||||||| ||||| | | |||| || |||||| Sbjct 2531 ACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCTTCA 2472 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | ||| ||||| ||| | || || | || || || ||| | || |||||||| | Sbjct 2471 AGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCTTGA 2412 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTG-TTTCGACGGTAATAGTTTT 101208 ||||| |||||||| | | || || | | | | | ||| | |||||| ||||| Sbjct 2411 ATTTTGGCTTTCACATTTTCAATGGTGTCCGAAG-CTTCGACTTCAAGGGTAATGGTTTT 2353 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||||| | ||||| | ||| || ||||| Sbjct 2352 ACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409639136496801