Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3973 84.2 2e-11 >seq3973 Length=340871 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||||||||| || || || | ||||| |||||||| ||||||||||| ||||| || Sbjct 307 AATATAAGTTTCAATGAGCAAAGAGTACATCTCAGAATGAATATTTTCTATGGCAATTTG 366 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 ||| || || || || | ||||| | | || ||||| | | ||| | || | | Sbjct 367 AAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACTTCTTGGCTGAATTTCTCAATCAG 426 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 || || || || ||||| || || ||||| || || || |||||||| |||||| Sbjct 427 ATTCTCATTAACGATACCATCGGAAGCGGCAAAGAATGCTAAGACATGAGAGATAAAGCG 486 Query 4997 CTGTTCGTCAGGCTTAAGTTTT---TTCCAGT 5025 | || || | || |||||| ||||||| Sbjct 487 TTTCTCATCGGAATTTAGTTTTTCATTCCAGT 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427027016949887