Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3641 111 2e-19 >seq3641 Length=2987713 Score = 111 bits (122), Expect = 2e-19 Identities = 185/265 (70%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 76965 GAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCAT 77024 |||| | || ||||| || |||| | ||| | |||||||| | || || || |||| Sbjct 2542262 GAAATTACCTGGACATCTGCTGATTATTAGTACAGGCATTAAATAGAGTTGGTGAAGCAT 2542203 Query 77025 GAGTGAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCAT 77083 | || || || ||| || || || ||| |||||||| || ||| || |||| | Sbjct 2542202 GTGTAAAATATCGTTCGGACAAATA-ATTATATGTTTCTATGACTTTATCAATATTATTT 2542144 Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTA 77143 | |||||| || ||||| || | |||||||||||| ||||| | || || ||||| | Sbjct 2542143 TCATGAATACCAACAGCTACTCTCATCAACATATGTTGAGGCCTCTCGACTATCTTACCA 2542084 Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 77203 || ||||||| || ||| | | || | ||||||||||||| ||| || || ||| Sbjct 2542083 TTGATTTTCAGCAGGTAACTTCTCTCAAGCGTTTTAAAACCAATATAATTATAATTGAAG 2542024 Query 77204 TCTCTTTCGTAAATAATAACCGAAT 77228 || | || || || ||| | |||| Sbjct 2542023 TCACGATCATATATTATAGCGGAAT 2541999 Score = 105 bits (116), Expect = 1e-17 Identities = 171/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 75688 GGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCG 75747 ||||||| ||| || | ||| ||||| ||||| |||||||||||||||||| | | Sbjct 2543947 GGTTAAATCTCGCAGTAAATGCGGATTGACAATAATAAATTCTCCAGACAATACGCGCCT 2543888 Query 75748 AGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGT 75807 || ||||| || ||||| ||||| | ||||| || || || ||||| || || || Sbjct 2543887 CACATATATATTGCTTGTATACGGTTCAATGGATTCGTTATTCCCTAAAATCTGTGCTGT 2543828 Query 75808 TGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTT 75867 || || || ||||||||||| | || | | |||||| | || || | ||| || Sbjct 2543827 CGAGGCCGTTGGCATAGGTGCTATTAAAAGAGAATTTCTTACTCCGTGCTTCGCGATCTT 2543768 Query 75868 ATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTG 75927 | || | | | ||||||||| | || || ||| ||| | ||| | ||| ||||| Sbjct 2543767 CGCCTTCAATTCATCCCAATCCCATAAATTTGTCGGTTTAACGTTCCACATATCATATTG 2543708 Query 75928 TAGAAT 75933 ||||| Sbjct 2543707 GAGAAT 2543702 Score = 86.0 bits (94), Expect = 9e-12 Identities = 106/142 (75%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567 ||||| || || |||||||||||||||||||||| || |||||| |||||| ||| Sbjct 2542900 GTATACAATTCTTTAAATTCATCTCCCCAAACATCAGATAAGCCAGGAGATTCATGTGGA 2542841 Query 76568 CACATCAATGACCACTCACCATCTTCCTTA---ACCCGTTTCATAAAGAGATCAGGTATC 76624 ||||| | | | | || | || || ||| || |||| |||||| ||||| |||||| Sbjct 2542840 CACATTA--GGCTCCACATC-TCGTCATTATATACACGTTCCATAAAAAGATCTGGTATC 2542784 Query 76625 CATAGAGCAATAAATAGATCTC 76646 |||||| | ||||| |||| Sbjct 2542783 CATAGACCGTAAAATAAGTCTC 2542762 Score = 84.2 bits (92), Expect = 3e-11 Identities = 223/335 (67%), Gaps = 8/335 (2%) Strand=Plus/Minus Query 76119 TACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAA 76178 ||||||||||||| ||||| | ||| || || | |||| ||||| ||| | |||| Sbjct 2543388 TACCAATAGGTCTGTGTCTGTGATTAGATGTTCTCGTTTCTTCGATAGGATAAAAGTTAA 2543329 Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238 ||| || | ||||| ||||| | || | ||| | || || ||||| | Sbjct 2543328 CATCGATGACTTTATCTAGATTACGAGTGACGATTTTTGCGACTGTTTTAAGTTTATCGA 2543269 Query 76239 AATC--AAATTTTCCA-TCTATC---ACAAACATATTAAGAGCTATAGATGCTAGATTAC 76292 |||| ||||||| ||||| || ||||| || | ||| |||||||||| ||| | Sbjct 2543268 AATCGAAAATTTTGGTGTCTATATTAACGAACATGTTGACAGCGATAGATGCTAAATTGC 2543209 Query 76293 AAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACT 76352 | || || || || || | | ||||| || || || ||||| | || || || | Sbjct 2543208 ATACAGCGACTTCTCCAGGACCAGAATATTCAATAATTTCGGTGCACAAGTTGCTGCATT 2543149 Query 76353 TGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAACA 76411 ||| ||| || | || ||| || || ||| ||| || ||| || || ||||| | | Sbjct 2543148 TGACAGTGCCTATATGTTGATGATTCGATTTTCGGTTGCAATGA-TCTTTGTAAAGCATA 2543090 Query 76412 AACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 | || ||||||||||| | || ||| || ||| Sbjct 2543089 TAAGGTGTTCCAGTTTCTACTTGGGATCTGAGAAT 2543055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712895732220480