Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3660 140 7e-28 seq3806 131 4e-25 seq3043 131 4e-25 >seq3660 Length=1598725 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| | ||||| || ||||| ||||||||||| | | || | || ||| Sbjct 290438 AGGACCAGATGCAAGGTAGATTCCTTTTGAATGTTGTAATCAGAAAGTGTACGACCGTCT 290497 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||||||||| | |||||||||||||| | ||||||||| || ||| Sbjct 290498 TCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCT 290557 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| |||||| |||| | ||||||| ||| ||||| | || ||||| Sbjct 290558 TGAATTTTGGCCTTGACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTC 290617 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || ||||| | ||||| Sbjct 290618 TTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290649 Score = 131 bits (144), Expect = 4e-25 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||| ||||| || || || || || |||||||| | ||||| | || Sbjct 291118 TCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAAGTACGTCC 291177 Query 151949 ATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||| || ||||| ||||| ||||| | | |||||| || | | ||| |||||| Sbjct 291178 ATCTTCCAGCTGCTTT--CCGGCAAAGATCAAACGCTGCTGATCAGGTGGGATACCTTCC 291235 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || ||| ||| ||| |||| | |||| ||| ||| ||||||||||| Sbjct 291236 TTATCCTGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACTTCAAGAGTT 291295 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| | ||||||||||| | |||||| Sbjct 291296 ATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || || || || || ||||| || | | || | ||| ||||| || ||| ||| Sbjct 289997 GTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCG 290056 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | ||||||||| |||| | ||| |||||||| || |||||||| |||| Sbjct 290057 GCGAAGATCAACCTCTGCTGATCCGGTGGGATACCTTCCTTGTCCTGAATTTTAGCTTTG 290116 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| |||| | | |||||| || || || || || |||||||| || |||||||| Sbjct 290117 ACATTCTCGATCGTATCTGAAGCTTCGACCTCCAGCGTGATAGTTTTACCAGTGAGAGTT 290176 Query 152088 TTCACGAAGACCTGCAT 152104 || || || | |||||| Sbjct 290177 TTGACAAAAATCTGCAT 290193 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || || || || || ||||| || | | || | ||| ||||| || ||| ||| Sbjct 290225 GTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGCCCGTCTTCAAGTTGTTTTCCG 290284 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | |||||||||||||| | ||||||||| || ||||||||||| ||| Sbjct 290285 GCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTG 290344 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| |||| | ||||||| ||| ||||| | || ||||| || || || ||||| Sbjct 290345 ACATTCTCAATAGTGTCTGACGCCTCAACTTCCAATGTGATAGTCTTTCCTGTCAGAGTT 290404 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||| | ||||| Sbjct 290405 TTGACGAAAATTTGCAT 290421 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| || ||||| ||||| ||||| ||||| || || || || || | |||||| Sbjct 289745 CTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGATAAAGTC 289804 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||| ||||| || || ||||| || || || || || || | | || ||| Sbjct 289805 CGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCT 289864 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || |||||||| || || | || | |||||||| ||| || || || Sbjct 289865 TCTTTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACCTCCAGC 289924 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| || |||||||| || || || | |||||| Sbjct 289925 GTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || || ||||| || || ||||| || | | || | || || Sbjct 290893 GAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTC 290952 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| || |||||||| | |||||||| || | | ||||||||| || || Sbjct 290953 TTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTC 291012 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| |||||| |||| | ||||||| ||| ||||| | || || || Sbjct 291013 TTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGT 291072 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || || || |||| ||||||| Sbjct 291073 CTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 291106 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || || ||||| || || ||||| || | | || | || || Sbjct 290665 GAGAACCAAATGCAATGTGGATTCTTTCTGAATATTGTAGTCAGAAAGCGTACGGCCGTC 290724 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| || |||||||| | |||||||| || | | ||||||||| || || Sbjct 290725 TTCAAGTTGTTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTC 290784 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| |||||| |||| | ||||||| ||| ||||| | || || || Sbjct 290785 TTGAATTTTGGCCTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGT 290844 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || ||||| | ||||| Sbjct 290845 CTTTCCTGTCAGAGTTTTGACGAAAATTTGCAT 290877 >seq3806 Length=402996 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || ||||| || || ||||| || ||||||||||| | | |||||| ||||||||| Sbjct 3215 ACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTTCTGCCATCTTCT 3156 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| |||||||| || || | ||| || |||| | ||||| || || || || Sbjct 3155 AGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGG 3096 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| || || | || | | | |||||| || ||||| || ||||| ||||| Sbjct 3095 ATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATTGTTTTA 3036 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || |||||||| |||||||||| |||||| Sbjct 3035 CCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || |||||||| || || ||||| | | |||||| |||||||| | Sbjct 2529 CAAG-TGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCTTCAA 2471 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || || | |||||| |||| | ||||| || || ||||||| Sbjct 2470 GTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCTTGAA 2411 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | |||| ||| || |||||||| ||||| ||||| | Sbjct 2410 TTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTTTTAC 2351 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| ||||| || || |||| |||||| Sbjct 2350 CCGTAAGAGTTTTTACAAAGATCTGCAT 2323 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || || || |||||||||||||||||||| | | |||||| |||||||| || | Sbjct 3437 TGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCATCTTCCAGTTGT 3378 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || |||||||| || || | ||| || |||| | ||||| || || || || ||||| Sbjct 3377 TTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTG 3318 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || || | || | | | |||||| || ||||| || ||||| ||||| || ||| Sbjct 3317 GCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATTGTTTTACCGGTG 3258 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 ||||| |||||||||| |||||| Sbjct 3257 AGAGTTTTCACGAAGATTTGCATT 3234 Score = 120 bits (132), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| ||||| || || ||||||||||| || | | |||||| ||||| Sbjct 2306 AGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCC 2247 Query 151953 TCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 |||| ||||| || || ||||| | | ||||| || | | || ||||| || | Sbjct 2246 TCTAATTGCTTT--CCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTGT 2189 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || ||||||| |||| | | || ||| ||||| ||||| ||||| | Sbjct 2188 CTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATGG 2129 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || |||||||| || || |||| ||||| Sbjct 2128 TTTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || || || || |||||||| || || | | || || |||||| Sbjct 2762 AGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGAAAGTGTCCTACCATCT 2703 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || || ||||| | | |||||||| | | || ||||| || ||| Sbjct 2702 TCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCT 2643 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| || | |||| | || || || ||||||||||| || ||| Sbjct 2642 TGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGAGTGATGGTT 2583 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || |||||||| |||||||||| |||||| Sbjct 2582 TTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| ||||| |||||||| ||||| || || | | || || || ||| Sbjct 2990 AGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAGAGTGTCCTACCGTCT 2931 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || || || || | | |||||||| | | || ||||| || ||| Sbjct 2930 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCT 2871 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| || | |||| |||| || || ||||||||||| || ||| Sbjct 2870 TGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTT 2811 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||| |||||||||| |||||| Sbjct 2810 TTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 >seq3043 Length=1629123 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 ||||||||||||||||||||| ||||| | ||||| || || ||| |||||||||| Sbjct 1068045 CTTTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 1067986 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||| || || | || ||||| ||||| || || || || |||||| ||| Sbjct 1067985 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCT 1067926 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | || || |||||| || || ||||| ||||| |||||||| || ||||||| Sbjct 1067925 CGATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGA 1067866 Query 152095 AGACCTGCAT 152104 ||| |||||| Sbjct 1067865 AGATCTGCAT 1067856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153756655135469