Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3806 178 3e-39 seq3660 176 9e-39 seq3043 149 1e-30 seq3501 95.1 3e-14 seq3782 89.7 1e-12 seq3588 89.7 1e-12 seq3482 89.7 1e-12 seq3458 89.7 1e-12 seq3105 89.7 1e-12 seq3810 86.0 1e-11 seq3804 86.0 1e-11 seq3840 84.2 5e-11 >seq3806 Length=402996 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||||||| | |||| ||| || |||||||| ||||| | | Sbjct 2777 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATAGTCTGAA 2718 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||| || | ||||| || ||||||||||| ||||| |||||| ||| Sbjct 2717 AGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGA 2658 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || |||||||||||||| ||||||||| | || || || || || ||||| ||| Sbjct 2657 ATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTATCAGAGGCTTCAACT 2598 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || |||||||| || ||||| || | ||| || ||||| || |||||| Sbjct 2597 TCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 2550 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || ||||| | ||| ||| || |||||||||||||||| | Sbjct 2321 CCTCCACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAA 2262 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||||||||| ||| || || ||||||||||||||||| || || ||| Sbjct 2261 AGAGTTCTGCCATCCTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 2202 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || |||||||||||||| ||||| || | |||||||| || |||||||| || Sbjct 2201 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACC 2142 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || || || || | ||| || || || || ||||| Sbjct 2141 TCAAGGGTAATGGTTTTTCCAGTGAGAGTTTTTACAAAGATTTGCAT 2095 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| ||| | || ||||||||| ||||| ||||| | Sbjct 3005 CCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATAGTCCGAG 2946 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | || || || | |||||| || ||||| ||||||||||| |||||| ||| Sbjct 2945 AGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGA 2886 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || |||||||||||||| ||||||||| | || || ||||| || ||||| ||| Sbjct 2885 ATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACT 2826 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || |||||||| || ||||| || | ||| || ||||| || |||||| Sbjct 2825 TCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCATT 2778 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || | ||||| || | |||| |||||| || |||||||| |||| | Sbjct 3233 CCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCAGAA 3174 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||| ||||||||||| ||||| || |||| ||| ||||| || ||| Sbjct 3173 AGAGTTCTGCCATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGA 3114 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| ||||| ||||| || || || ||| | ||||| || || |||||||| ||| Sbjct 3113 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCTTCAACT 3054 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| || || || ||||| || | ||| || ||||| || |||||| Sbjct 3053 TCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3006 Score = 163 bits (180), Expect = 6e-35 Identities = 152/193 (79%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||||||||||||||| |||| ||| || | |||||| || |||||||| ||||| || Sbjct 3426 TTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCATCTTCCAGTTGTTTGCCGGCGAA 3367 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||| ||| ||||| || ||||| ||||| ||||| ||||| || || || ||| | Sbjct 3366 AATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTT 3307 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || |||||||| |||||||| || || || ||||| || | ||| || || Sbjct 3306 TTCGATGGTATCTGAAGCTTCAACTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCAC 3247 Query 283088 GAATATCTGCATT 283100 ||| || |||||| Sbjct 3246 GAAGATTTGCATT 3234 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || ||||| |||| || | ||| ||||||||| || || || |||| Sbjct 2549 CCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 2490 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||| || ||||| || || ||||| |||| ||| || || || ||| Sbjct 2489 AGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 2430 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| |||||||| || || ||||| || | || || |||||||||||||||||| Sbjct 2429 ATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGCTTCGACT 2370 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || |||||||| | ||| || || || |||||||| Sbjct 2369 TCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCAT 2323 >seq3660 Length=1598725 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||| | || || | ||| | ||| ||| || || || ||||| |||| Sbjct 291107 CCACCACGCAATCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGAC 291166 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || || ||||| || || || || ||||||||||||||||| || || ||| || Sbjct 291167 AAAGTACGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGGTGGG 291226 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| ||||| || ||||||||||||||||| | || |||||||| ||||| || ||| Sbjct 291227 ATACCTTCCTTATCCTGGATCTTTGCTTTTACATTCTCAATAGTGTCAGAAGCCTCAACT 291286 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || ||||| |||||||| ||||| ||||| |||||||| Sbjct 291287 TCAAGAGTTATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCAT 291333 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||| ||| || ||| ||| || || || |||||||||| Sbjct 289966 ACCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGA 290025 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || || || || |||||||| ||||| |||||||| | || || || || Sbjct 290026 AAGTGTACGCCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGG 290085 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| || || || ||||| || | ||||| || || ||||||||||| Sbjct 290086 GATACCTTCCTTGTCCTGAATTTTAGCTTTGACATTCTCGATCGTATCTGAAGCTTCGAC 290145 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || ||||| || | ||| || || || |||||||| Sbjct 290146 CTCCAGCGTGATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 290193 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || |||||||| || || | || |||||| || || || ||||| | | || || Sbjct 289748 AGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCTGATAAAGTCCGT 289807 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||||||||| || || || || || |||| | |||||| || ||||| || || Sbjct 289808 CCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTCT 289867 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 || || || || || || || ||| | ||||| ||||| ||||| ||||| || || || Sbjct 289868 TTATCCTGAATTTTCGCCTTCACGTTTTCGATCGTGTCTGAAGCCTCGACCTCCAGCGTA 289927 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || | ||| || || || |||||||| Sbjct 289928 ATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 289965 >seq3043 Length=1629123 Score = 149 bits (164), Expect = 1e-30 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||||||||||||||| || | | ||||| |||||||| || ||||| ||||| |||| Sbjct 1068045 CTTTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 1067986 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 | | || ||||| || |||||| ||||||||||| |||||||| || || || | | Sbjct 1067985 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCT 1067926 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||||| || || || || || ||||| || || || |||||||| | || || |||| Sbjct 1067925 CGATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGA 1067866 Query 283090 ATATCTGCAT 283099 | |||||||| Sbjct 1067865 AGATCTGCAT 1067856 >seq3501 Length=2462047 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 273778 TCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACT 273837 ||||||||||||| || | ||| ||| ||||| ||||| || || | ||| || | Sbjct 1156811 TCGTGAAAATGTATCTCGGACTGGCAGAATCCTTTCCACCAGCAAGTCTTGTACCGAATT 1156752 Query 273838 GACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCA 273897 |||| |||| ||||| || |||||||||||||| ||| ||| ||| || | ||| | Sbjct 1156751 GACCGATGGGCTGTAGCAGATTAATGTTGTTGCTACCCACGAAATTCTGCGCGAGATTAA 1156692 Query 273898 CGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAAC 273957 | || ||| || || || ||| ||||| ||||| || |||||||| | | | | Sbjct 1156691 CTATGGTCGCCATCAGAGACGTCTCACCGTGATGATAAGCAGAATGTTCGGCAACAGATC 1156632 Query 273958 CACTGAACTGAGCAACCTTCACATCGC 273984 | || || || || ||||| |||| Sbjct 1156631 CCGCCAATTGCGCGACTTTCACTTCGC 1156605 >seq3782 Length=2392144 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 820159 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 820103 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 820459 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 820403 >seq3588 Length=341734 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 61478 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 61422 >seq3482 Length=591202 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 417412 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 417468 >seq3458 Length=599409 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 488068 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 488124 >seq3105 Length=3863317 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1703861 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1703917 >seq3810 Length=1951587 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 184053 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 184109 >seq3804 Length=985150 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 353862 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 353918 >seq3840 Length=147269 Score = 84.2 bits (92), Expect = 5e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||| ||| || || | ||||| || ||| ||||||||||| ||||| | Sbjct 133578 ACCACCTCGCAAGCGCAGCACTAAGTGTAAAGTAGATTCCTTTTGGATGTTATAGTCCGA 133637 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||| |||| ||| || |||||||||||||| | ||| || || ||| Sbjct 133638 CAAAGTTCTGCCATCTTCTAATTGCTTACCGGCAAAGATCAATCTTTGCTGATCTGGCGG 133697 Query 282992 AATACC 282997 ||| || Sbjct 133698 AATTCC 133703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046681008169706