Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3973 89.7 5e-13 >seq3973 Length=340871 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/181 (71%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||||||| ||| | ||||| || ||||| || ||| ||||| |||||||||||| Sbjct 290 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAGTACATCTCAGAATGAATA 349 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 ||||| || ||||| ||||| ||||| ||||| | ||||| | | || || || | Sbjct 350 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACTTCTTGG 409 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGC-AAG 23939 ||| | | | | ||| || ||||| |||||||| ||| |||||||| || ||| Sbjct 410 CTGAATTTCTCAATCAGATTCTCATTAACGATACCATCGGAAGCGGCAAAGAATGCTAAG 469 Query 23940 A 23940 | Sbjct 470 A 470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521459715794600