Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3660 116 3e-21 seq3806 111 1e-19 seq3043 107 1e-18 >seq3660 Length=1598725 Score = 116 bits (128), Expect = 3e-21 Identities = 169/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || ||| | || | || || ||| ||||| || || |||||||| Sbjct 291103 CATTCCACCACGCAATCTGAGAACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAATC 291162 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | || ||||||||||| |||||||||||||||||||||||||| | Sbjct 291163 AGACAAAGTACGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCAGG 291222 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||||||||| ||| ||||| ||||| | ||| | || ||||| | | | Sbjct 291223 TGGGATACCTTCCTTATCCTGGATCTT-TGCTTTTACATTCTCAATAGTGTCAGAAGCCT 291281 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 | || || | || || ||||| ||||| | ||||||||||| || |||||| || Sbjct 291282 CAACTTCAAGAGTTATGGTCTTCCCCGTCAATGTCTTCACGAAAATCTGCATGGTG 291337 >seq3806 Length=402996 Score = 111 bits (122), Expect = 1e-19 Identities = 158/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || || |||||||| ||||| ||||||||||| || | ||||| || | || | Sbjct 2303 ACAAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCT-GC-CATCCT 2246 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | | ||||| || |||||||||||||| |||||||||| ||| | |||||| || || Sbjct 2245 CTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTT 2186 Query 44247 TTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| |||| | ||| | || || || | | ||| ||||| | ||||| || Sbjct 2185 GGATCTT-AGCTTTGACATTCTCGATAGTATCAGAAGCTTCTACCTCAAGGGTAATGGTT 2127 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| ||||| || || || ||||||||||||||| Sbjct 2126 TTTCCAGTGAGAGTTTTTACAAAGATTTGCATGATG 2091 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || ||||| ||||||||| ||||| |||||||| || Sbjct 2784 TTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTATA 2725 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| | | || |||| ||| || || ||||||||||| || ||||| || Sbjct 2724 GTCTGAAAGTGTCCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGTTGCTGGTC 2665 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | ||||| || || ||||| |||| | ||| |||| || || | || Sbjct 2664 AGGAGGAATGCCTTCTTTGTCTTGGATCTTA-GCTTTTACGTTTTCTATTGTATCAGAGG 2606 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || || || ||||| || ||||||||||||||||| Sbjct 2605 CTTCAACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 2551 Score = 109 bits (120), Expect = 4e-19 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | ||| ||||||||||||||| || || || |||||||| Sbjct 3240 TTGCATTCCTCCTCGAAGACGCAAAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTA 3181 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | ||||| || | || || || || || ||||| || |||| |||||| ||| Sbjct 3180 ATCAGAAAGAGTTCT-GC-CATCTTCTAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGA 3123 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 || | || | || || || ||| || || ||||| || | ||||| || | Sbjct 3122 TCCGGTGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAA 3063 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | ||||| || || || ||||| || ||||||||||||||||| Sbjct 3062 GCTTCAACTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3007 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || |||| ||||| || || ||||| ||||| || Sbjct 3012 TTGCATTCCTCCTCGAAGACGCAGAACCAAATGAAGGGTAGATTCTTTTTGAATGTTATA 2953 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | |||| | |||| |||| || || || ||||| |||||||| ||||| || Sbjct 2952 GTCCGAGAGTGTCCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGGTC 2893 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | ||||| || || ||||| |||| | ||| |||| ||||| | || Sbjct 2892 AGGAGGAATGCCTTCTTTGTCTTGGATCTTA-GCTTTTACGTTTTCTATTGTGTCAGAGG 2834 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || || || || || || ||||||||||||||||| Sbjct 2833 CTTCAACTTCAAGAGTGATGGTTTTACCGGTAAGAGTTTTCACGAAGATTTGCAT 2779 Score = 95.1 bits (104), Expect = 9e-15 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | |||| || || | ||| || ||| || ||||||||||||||||| Sbjct 3465 CATACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATC 3406 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| || | || ||||| || || ||||| || |||| |||||| ||||| Sbjct 3405 AGAAAGAGTTCT-GC-CATCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCC 3348 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | || || || ||| || || ||||| || | ||||| || | | | Sbjct 3347 GGTGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCGATGGTATCTGAAGCT 3288 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| || || || ||||| || ||||||||||||||||| Sbjct 3287 TCAACTTCGAGGGTAATTGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3235 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | | |||| |||||| ||| || ||||| || || || Sbjct 2556 TTGCATTCCTCCTCGAAGACGAAGAACCAAGTGAAGTGTGGATTCTTTTTGAATATTATA 2497 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| | | || || || ||||| || ||||| |||| |||||||||||| Sbjct 2496 ATCAGAGAGAGTTCTGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATC 2437 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | || || || || || || |||| || | |||||||| | | Sbjct 2436 CGGGGGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTGTCCGAAGC 2377 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || | ||||| || || ||||| || || || || ||||| |||||| Sbjct 2376 TTCGACTTCAAGGGTAATGGTTTTACCCGTAAGAGTTTTTACAAAGATCTGCATG 2322 >seq3043 Length=1629123 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209 ||||||||||||||||||| | ||| | || |||||||| || ||||| ||||| Sbjct 1068043 TTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGATG 1067984 Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCT 44269 | ||||| ||||||| || | || ||||| ||| ||||| ||| | | | Sbjct 1067983 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCG 1067924 Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 || || || | || || ||||| | ||||| || || ||||||||||| ||||||||| Sbjct 1067923 ATAGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAG 1067864 Query 44330 ATTTGCATGATG 44341 || |||||| || Sbjct 1067863 ATCTGCATGGTG 1067852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359971363145163