Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03]
4,339 sequences; 295,944,863 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3806 190 5e-43
seq3660 168 2e-36
seq3043 161 2e-34
>seq3806
Length=402996
Score = 190 bits (210), Expect = 5e-43
Identities = 171/215 (80%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||||||||| || ||||| || |||||||| || ||| |||||
Sbjct 3238 CAAATCTTCGTGAAAACTCTCACCGGTAAAACAATTACCCTCGAAGTTGAAGCTTCAGAT 3297
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || || || ||||||||||| ||||| || ||||| || ||
Sbjct 3298 ACCATCGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAACAG 3357
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| ||||| || |||||||| || |||||| | ||||| ||| ||
Sbjct 3358 CGTCTGATTTTCGCCGGCAAACAACTGGAAGATGGCAGAACTCTTTCTGATTACAACATC 3417
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||||||||| ||||| || | ||||| ||||
Sbjct 3418 CAAAAAGAATCCACACTCCACTTAGTTTTACGACT 3452
Score = 181 bits (200), Expect = 3e-40
Identities = 166/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||||||||| || ||||| ||||| || || || ||| ||| ||
Sbjct 2554 CAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCTGAT 2613
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| ||||| || ||||||||||| || ||||| |||||||||
Sbjct 2614 ACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAA 2673
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| || || |||||| | |||||||| ||||| ||| | || |||||| ||
Sbjct 2674 CGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGGACACTTTCAGACTATAACATC 2733
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || ||||| || || ||||| ||| ||
Sbjct 2734 CAGAAGGAATCCACGCTTCATCTGGTTCTG 2763
Score = 181 bits (200), Expect = 3e-40
Identities = 166/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||||||||| || ||||| || |||||||| || ||| |||||
Sbjct 3010 CAAATCTTCGTGAAAACTCTCACCGGTAAAACAATTACCCTCGAAGTTGAAGCTTCAGAT 3069
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || || || ||||||||||| ||||| || ||||| || ||
Sbjct 3070 ACCATCGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAACAG 3129
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| ||||| || |||||||| || |||||| | ||||| ||| |
Sbjct 3130 CGTCTGATTTTCGCCGGCAAACAACTAGAAGATGGCAGAACTCTTTCTGATTACAACATT 3189
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| |||||||| || || || || ||||||
Sbjct 3190 CAGAAAGAATCCACGCTTCACCTGGTTTTG 3219
Score = 167 bits (184), Expect = 6e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||||||||| |||||||| || ||||| ||||| ||| || ||
Sbjct 2098 CAAATCTTTGTAAAAACTCTCACTGGAAAAACCATTACCCTTGAGGTAGAAGCTTCTGAT 2157
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| |||||| ||||| || ||||||||||| || ||||| || ||||||
Sbjct 2158 ACTATCGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAGCAA 2217
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||| || | || ||||| || |||||| | || || ||| ||
Sbjct 2218 CGTTTGATCTTTGCTGGAAAGCAATTAGAGGATGGCAGAACTCTTTCTGACTACAACATC 2277
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || ||||| || || ||||||||| ||
Sbjct 2278 CAGAAGGAATCTACGCTTCATCTTGTTCTG 2307
Score = 158 bits (174), Expect = 3e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||||| || || ||||| ||||| || || || ||| ||| |||
Sbjct 2782 CAAATCTTCGTGAAAACTCTTACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCTGAC 2841
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| ||||| || ||||||||||| || ||||| |||||||||
Sbjct 2842 ACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAGCAA 2901
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || ||||| | ||||| || ||||| || | || |||||| |
Sbjct 2902 CGTTTGATTTTTGCTGGTAAACAATTGGAAGACGGTAGGACACTCTCGGACTATAACATT 2961
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||||||||| || || ||| | ||| ||
Sbjct 2962 CAAAAAGAATCTACCCTTCATTTGGTTCTG 2991
Score = 141 bits (156), Expect = 2e-28
Identities = 157/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || |||||||| || || ||||| || ||||| || || ||| || |||
Sbjct 2326 CAGATCTTTGTAAAAACTCTTACGGGTAAAACCATTACCCTTGAAGTCGAAGCTTCGGAC 2385
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| || ||||| |||||||| ||||| || ||||| |||||
Sbjct 2386 ACCATTGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCGGATCAGCAG 2445
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || || || || || || |||||||| || ||||| | |||||||| |
Sbjct 2446 CGTCTGATTTTTGCTGGCAAGCAACTTGAAGATGGCAGAACTCTCTCTGATTATAATATT 2505
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
||||||||||| ||||| || |||| ||
Sbjct 2506 CAAAAAGAATCCACACTTCA-CTTGGTT 2532
>seq3660
Length=1598725
Score = 168 bits (186), Expect = 2e-36
Identities = 161/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| |||||||| || ||||| | || || || ||||||
Sbjct 290646 CAAATTTTCGTCAAAACTCTGACAGGAAAGACTATCACATTGGAAGTTGAGGCGTCAGAC 290587
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| ||||| || ||||| ||||||||||||||||| |||||||||||
Sbjct 290586 ACTATTGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCACCGGACCAGCAG 290527
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||||||||||||||| || ||||| || | || ||| | ||||| ||| |
Sbjct 290526 AGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGTCGTACACTTTCTGATTACAACATT 290467
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| || ||||||| ||
Sbjct 290466 CAAAAGGAATCTACCTTGCATCTGGT 290441
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || ||||||||||| || ||||| ||||| || ||||| ||| |||||
Sbjct 290190 CAGATTTTTGTCAAAACTCTCACTGGTAAAACTATCACGCTGGAGGTCGAAGCTTCAGAT 290131
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| |||||| || ||||||||||| ||||| ||||| ||||| |||||
Sbjct 290130 ACGATCGAGAATGTCAAAGCTAAAATTCAGGACAAGGAAGGTATCCCACCGGATCAGCAG 290071
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||||||||||||||| || ||||| || | || ||| | || || || |
Sbjct 290070 AGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGGCGTACACTTTCTGACTACAATATT 290011
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||||| ||| ||||| | |||||||| ||
Sbjct 290010 CAGAAGGAATCCACATTGCATTTGGTTTTGAGGCT 289976
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| |||||||| || ||||| | || || || ||||||
Sbjct 290418 CAAATTTTCGTCAAAACTCTGACAGGAAAGACTATCACATTGGAAGTTGAGGCGTCAGAC 290359
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| ||||| || ||||| ||||||||||||||||| |||||||||||
Sbjct 290358 ACTATTGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCACCGGACCAGCAG 290299
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||||||||||||||| || ||||| || | || ||| | || || || |
Sbjct 290298 AGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGGCGTACACTTTCTGACTACAATATT 290239
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||||| ||| ||||| | |||||||| ||
Sbjct 290238 CAGAAGGAATCCACATTGCATTTGGTTTTGAGGCT 290204
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| |||||||| || ||||| | || || || ||||||
Sbjct 290874 CAAATTTTCGTCAAAACTCTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCAGAC 290815
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| ||||| || ||||| ||||||||||||||||| || || |||||
Sbjct 290814 ACGATCGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCCCCAGATCAGCAG 290755
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| |||||||| || ||||| || | || ||| | || || || |
Sbjct 290754 AGATTGATCTTCGCTGGAAAACAACTTGAAGACGGCCGTACGCTTTCTGACTACAATATT 290695
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| |||||||| ||| ||||| | |||
Sbjct 290694 CAGAAAGAATCCACATTGCATTTGGTT 290668
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || ||||||||||| || ||||| || || || ||||| || ||||||
Sbjct 289962 CAGATTTTTGTCAAAACTCTCACTGGTAAAACTATTACGCTGGAGGTCGAGGCTTCAGAC 289903
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || || |||||||| |||||||| || ||||| || || |||
Sbjct 289902 ACGATCGAAAACGTGAAGGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAACAA 289843
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||| || || ||||| || |||||| ||||| | | || ||||| |
Sbjct 289842 AGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCAGACTATAATATT 289783
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| ||||| || ||||| | |||| |||
Sbjct 289782 CAGAAAGAATCTACACTTCACCTTGTACTTCGACTTAGA 289744
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || ||||| || |||||||| || ||||| | || || || ||||||
Sbjct 291102 CAGATCTTTGTCAAAACCCTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCAGAC 291043
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| ||||| || ||||| ||||||||||||||||| || || |||||
Sbjct 291042 ACGATCGAGAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCCCCAGATCAGCAG 290983
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| |||||||| || ||||| || | || ||| | || || || |
Sbjct 290982 AGATTGATCTTCGCTGGAAAACAACTTGAAGACGGCCGTACGCTTTCTGACTACAATATT 290923
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| |||||||| ||| ||||| | |||
Sbjct 290922 CAGAAAGAATCCACATTGCATTTGGTT 290896
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || | || || || || || || || || || || || |||
Sbjct 291330 CAGATTTTCGTGAAGACATTGACGGGGAAGACCATAACTCTTGAAGTTGAGGCTTCTGAC 291271
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| || ||| |||||| ||||| || ||||| ||||| || || |||||
Sbjct 291270 ACTATTGAGAATGTAAAAGCAAAGATCCAGGATAAGGAAGGTATCCCACCTGATCAGCAG 291211
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| |||||||| ||||| ||||||||| | ||| | | ||||| || |
Sbjct 291210 CGTTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGACGTACTTTGTCTGATTACAATATT 291151
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || ||||| || || ||| | ||| | |||
Sbjct 291150 CAGAAGGAATCCACTCTCCATTTAGTTCTCAGA 291118
>seq3043
Length=1629123
Score = 161 bits (178), Expect = 2e-34
Identities = 148/187 (79%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| ||||| || ||||| || ||||||||||| || ||| ||
Sbjct 1067859 CAGATCTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTCGAGGTAGAGGCCTCTGAT 1067918
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| ||||| ||||| |||||||| || ||||| || || || || ||
Sbjct 1067919 ACTATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCAACAG 1067978
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| ||||||||||| |||||||| || |||||| | ||| | ||||||| ||| ||
Sbjct 1067979 CGACTCATCTTCGCCGGCAAACAGCTGGAGGATGGACGCACTTTGTCCGATTACAACATC 1068038
Query 178104 CAAAAAG 178110
|||||||
Sbjct 1068039 CAAAAAG 1068045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203664280444766
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |