Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq10794 100 6e-16
seq1140 100 6e-16
seq430 100 6e-16
seq1117 98.7 2e-15
seq648 98.7 2e-15
seq146 98.7 2e-15
seq339 95.1 3e-14
seq412 93.3 9e-14
seq67 86.0 1e-11
>seq10794
Length=891
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||
Sbjct 739 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 798
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 799 CCCCACGTTGGGC 811
>seq1140
Length=133107
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||
Sbjct 24374 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 24433
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 24434 CCCCACGTTGGGC 24446
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||
Sbjct 37925 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 37984
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 37985 CCCCACGTTGGGC 37997
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 39575 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 39516
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 39515 CCCACGTTGGGC 39504
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 95254 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 95313
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 95314 CCCACGTTGGGC 95325
>seq430
Length=650307
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||
Sbjct 255998 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 256057
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 256058 CCCCACGTTGGGC 256070
>seq1117
Length=229805
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 198111 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 198052
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 198051 CCCACGTTGGGC 198040
>seq648
Length=167369
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 131757 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 131816
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 131817 CCCACGTTGGGC 131828
>seq146
Length=840336
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 576014 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 576073
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 576074 CCCACGTTGGGC 576085
>seq339
Length=498468
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| ||||||||||||||||
Sbjct 229503 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 229444
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 229443 CCCACGCTGGGC 229432
>seq412
Length=740082
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775
||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||
Sbjct 402848 CTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACG 402789
Query 165776 ATGGGC 165781
|||||
Sbjct 402788 TTGGGC 402783
>seq67
Length=777735
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| |||||||||| |||||||| ||||| ||||||| ||||||||||||||||
Sbjct 618326 GCCCGGCTAGCTCAGTTGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 618267
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 618266 CCCACGCTGGGC 618255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057499735622750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |