Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq430 125 5e-24
>seq430
Length=650307
Score = 125 bits (138), Expect = 5e-24
Identities = 228/331 (69%), Gaps = 2/331 (1%)
Strand=Plus/Plus
Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811
||| ||||| || ||||| | || | | ||||| || ||||| ||||| || |||||
Sbjct 87986 AGTAACATGGGCTATCATATATGTAAGTAATGAATAACTGGCAATATTAAAGGGTACTCC 88045
Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871
|| ||||| || ||||||| ||| |||| |||||| || || | ||||| |||| |
Sbjct 88046 TAGACCCATGTCTGCTGATCGTTGGTACATTTGACACGACAGATAGCCATCGGCGACAAA 88105
Query 101872 AAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCC 101930
||| || || | | |||||| || || || |||||||||| | || | |||||
Sbjct 88106 AAACTGTACCAGACA-ATGACACGGTGGTAAGGCCATTTTAGGTACATCACATGGATTCC 88164
Query 101931 AAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTT 101990
| || ||| | ||| | ||||| |||||| ||||| || |||| || | | ||
Sbjct 88165 ATGCGATCATAAGCATTCGCCTATCGTCAGGGTTAGTTTTGATTGTATTGATGACGTTTT 88224
Query 101991 TTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGA 102050
| ||| |||| |||| ||| ||||| ||| || ||| || || ||
Sbjct 88225 GAAGTTGATCAATGCCTTTTCCAGAGTAATCAGTATGCACATCTACATACTCAGCACCAT 88284
Query 102051 AATGCCTCCACTGAAATCCATACACAGGTCC 102081
|||| | ||| ||||||||||| ||||||||
Sbjct 88285 AATGTCGCCATTGAAATCCATAAACAGGTCC 88315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361145864230175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |