Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq430 125 5e-24 >seq430 Length=650307 Score = 125 bits (138), Expect = 5e-24 Identities = 228/331 (69%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| ||||| || ||||| | || | | ||||| || ||||| ||||| || ||||| Sbjct 87986 AGTAACATGGGCTATCATATATGTAAGTAATGAATAACTGGCAATATTAAAGGGTACTCC 88045 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 || ||||| || ||||||| ||| |||| |||||| || || | ||||| |||| | Sbjct 88046 TAGACCCATGTCTGCTGATCGTTGGTACATTTGACACGACAGATAGCCATCGGCGACAAA 88105 Query 101872 AAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCC 101930 ||| || || | | |||||| || || || |||||||||| | || | ||||| Sbjct 88106 AAACTGTACCAGACA-ATGACACGGTGGTAAGGCCATTTTAGGTACATCACATGGATTCC 88164 Query 101931 AAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTT 101990 | || ||| | ||| | ||||| |||||| ||||| || |||| || | | || Sbjct 88165 ATGCGATCATAAGCATTCGCCTATCGTCAGGGTTAGTTTTGATTGTATTGATGACGTTTT 88224 Query 101991 TTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGA 102050 | ||| |||| |||| ||| ||||| ||| || ||| || || || Sbjct 88225 GAAGTTGATCAATGCCTTTTCCAGAGTAATCAGTATGCACATCTACATACTCAGCACCAT 88284 Query 102051 AATGCCTCCACTGAAATCCATACACAGGTCC 102081 |||| | ||| ||||||||||| |||||||| Sbjct 88285 AATGTCGCCATTGAAATCCATAAACAGGTCC 88315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361145864230175