Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq2906 86.0 5e-13 >seq2906 Length=4728 Score = 86.0 bits (94), Expect = 5e-13 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 6788 CCACACTGATTGCAGTACCAGGTGCCGCGCCCCTCCCTGTCATCAAAACGGAAGCGGTCA 6847 || |||||||| ||| |||| || ||||||||||| ||||||||| ||||||||| || Sbjct 393 CCGCACTGATTACAGAACCATGTTCCGCGCCCCTCTTTGTCATCAAGACGGAAGCGATCT 334 Query 6848 CTCCCGCCACAGACCGGACAGG 6869 | ||||| ||| ||||||||| Sbjct 333 TTTCCGCCGCAGGCCGGACAGG 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37071619255600