Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq430 161 7e-35 >seq430 Length=650307 Score = 161 bits (178), Expect = 7e-35 Identities = 243/344 (71%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||| |||||||| |||||| | || | || ||||| || ||||| ||||| || || | Sbjct 87985 CAGTAACATGGGCTATCATATATGTAAGTAATGAATAACTGGCAATATTAAAGGGTACTC 88044 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 |||| ||||| || ||||||| ||| || | ||||| || || | ||||| ||| Sbjct 88045 CTAGACCCATGTCTGCTGATCGTTGGTACATTTGACACGACAGATAGCCATCGGCGACAA 88104 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCC 97294 ||||||| || |||||| || || || |||||||| || ||||| | ||||| Sbjct 88105 AAAACTGTACCAGACAATGACACGGTGGTAAGGCCATTTTAGGTACATCACATGGATTCC 88164 Query 97295 AAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCT 97354 | || ||| | ||||| |||||| ||||| || | || ||||| || | | | Sbjct 88165 ATGCGATCATAAGCATTCGCCTATCGTCAGGGTTAGTTTTGATTGTATTGATGACGTTTT 88224 Query 97355 TTAATTGATCAACGCCTTCTCCACCATAAT---TGTGCTTAAGACCTTGATATTCTGCTC 97411 | |||||||| ||||| |||| |||| | ||| | | || ||| || || | Sbjct 88225 GAAGTTGATCAATGCCTTTTCCAGAGTAATCAGTATGC---ACATCTACATACTCAGCAC 88281 Query 97412 CAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 || |||| | |||||| ||||||||||||||||| | ||| ||| Sbjct 88282 CATAATGTCGCCATTGAAATCCATAAACAGGTCCCAAGTCACCT 88325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346682882662250