Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq328 89.7 9e-13
>seq328
Length=376668
Score = 89.7 bits (98), Expect = 9e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 188841 TTATACAAGTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTGATAAAGAAGAAT 188900
||||||| ||||| || |||||||| ||||||||||||| |||||||| ||| ||||||
Sbjct 43131 TTATACAGGTAGATGCCCATAATATTGTACCTTGTTGGGTGGCTTCTGACAAACAAGAAT 43190
Query 188901 ACGGTGCACGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAAT 188960
| ||| |||| || |||| || || | |||||||| || | | | |||||||
Sbjct 43191 ATTCCGCAAGAACAATACGAAACAAAATCAATAATAAATTACCAGAGTTTTTAACAGAAT 43250
Query 188961 TTCC 188964
| ||
Sbjct 43251 TCCC 43254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922920706457000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |