Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq328 89.7 9e-13 >seq328 Length=376668 Score = 89.7 bits (98), Expect = 9e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 188841 TTATACAAGTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTGATAAAGAAGAAT 188900 ||||||| ||||| || |||||||| ||||||||||||| |||||||| ||| |||||| Sbjct 43131 TTATACAGGTAGATGCCCATAATATTGTACCTTGTTGGGTGGCTTCTGACAAACAAGAAT 43190 Query 188901 ACGGTGCACGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAAT 188960 | ||| |||| || |||| || || | |||||||| || | | | ||||||| Sbjct 43191 ATTCCGCAAGAACAATACGAAACAAAATCAATAATAAATTACCAGAGTTTTTAACAGAAT 43250 Query 188961 TTCC 188964 | || Sbjct 43251 TCCC 43254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922920706457000