Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq430 199 3e-46 >seq430 Length=650307 Score = 199 bits (220), Expect = 3e-46 Identities = 253/348 (73%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||| ||||| ||||||||||||||| |||||| ||| ||||| ||||| || Sbjct 88324 GGTGACTTGGGACCTGTTTATGGATTTCAATGGCGACATTATGGTGCTGAGTATGTAGAT 88265 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 || | || |||| | |||| |||| | |||||| | ||||| || || ||| ||| Sbjct 88264 GTGCATACTGATTACTCTGGAAAAGGCATTGATCAACTTCAAAACGTCATCAATACAATC 88205 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||||| ||||| |||| || |||| || | ||| ||||| | ||||| ||| Sbjct 88204 AAAACTAACCCTGACGATAGGCGAATGCTTATGATCGCATGGAATCCATGTGATGTACCT 88145 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457 |||||| || || || |||||| || || |||| || || || | || Sbjct 88144 AAAATGGCCTTACCACCGTGTCATTGTCTGGTACAGTTTTTTGTCGCCGATGGCTATCTG 88085 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 |||||||||||||| |||||||| || || ||||| || || || || || |||||||| Sbjct 88084 TCGTGTCAAATGTACCAACGATCAGCAGACATGGGTCTAGGAGTACCCTTTAATATTGCC 88025 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 |||||| | | ||||| |||||||| || |||||||| | |||||| Sbjct 88024 AGTTATTCATTACTTACATATATGATAGCCCATGTTACTGGATTAAAA 87977 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| | || || || ||| |||| |||||| || ||||| ||||| ||||||||| Sbjct 88682 TTTCCACTGTTGACAACAAAAAGGGTGTTTTGGCGTGGTGTTGTCGAAGAATTATTATGG 88623 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGG 20160 ||||||||||| || |||||||||| || || ||||||| || || ||||| Sbjct 88622 TTTATTAAAGGCTCGACAAATTCTAAAGAACTATCTGAAAAAGATGTAAAAGTTTGG 88566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399067603559125