Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq430 199 3e-46
>seq430
Length=650307
Score = 199 bits (220), Expect = 3e-46
Identities = 253/348 (73%), Gaps = 0/348 (0%)
Strand=Plus/Minus
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| || ||||| ||||| ||||||||||||||| |||||| ||| ||||| ||||| ||
Sbjct 88324 GGTGACTTGGGACCTGTTTATGGATTTCAATGGCGACATTATGGTGCTGAGTATGTAGAT 88265
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337
|| | || |||| | |||| |||| | |||||| | ||||| || || ||| |||
Sbjct 88264 GTGCATACTGATTACTCTGGAAAAGGCATTGATCAACTTCAAAACGTCATCAATACAATC 88205
Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397
||||| ||||| |||| || |||| || | ||| ||||| | ||||| |||
Sbjct 88204 AAAACTAACCCTGACGATAGGCGAATGCTTATGATCGCATGGAATCCATGTGATGTACCT 88145
Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457
|||||| || || || |||||| || || |||| || || || | ||
Sbjct 88144 AAAATGGCCTTACCACCGTGTCATTGTCTGGTACAGTTTTTTGTCGCCGATGGCTATCTG 88085
Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517
|||||||||||||| |||||||| || || ||||| || || || || || ||||||||
Sbjct 88084 TCGTGTCAAATGTACCAACGATCAGCAGACATGGGTCTAGGAGTACCCTTTAATATTGCC 88025
Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565
|||||| | | ||||| |||||||| || |||||||| | ||||||
Sbjct 88024 AGTTATTCATTACTTACATATATGATAGCCCATGTTACTGGATTAAAA 87977
Score = 86.0 bits (94), Expect = 5e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103
||||| | || || || ||| |||| |||||| || ||||| ||||| |||||||||
Sbjct 88682 TTTCCACTGTTGACAACAAAAAGGGTGTTTTGGCGTGGTGTTGTCGAAGAATTATTATGG 88623
Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGG 20160
||||||||||| || |||||||||| || || ||||||| || || |||||
Sbjct 88622 TTTATTAAAGGCTCGACAAATTCTAAAGAACTATCTGAAAAAGATGTAAAAGTTTGG 88566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399067603559125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |