Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq355 87.8 2e-12 >seq355 Length=435918 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/192 (70%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 73908 ATTGTTCATAGATATCTTCAAAATGGAGATATACTAGTGCTAAATAGACAACCTACTTTA 73967 |||||||| ||| || || |||| ||||| | | | ||| |||| || ||||| Sbjct 41737 ATTGTTCACAGACATGTTATTGATGGGGATATGATGCTTGTTAATCGACAGCCATCTTTA 41678 Query 73968 CATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATGGATGTA---AAAACCTTTAAA 74024 || ||| | || ||||| | | ||||||| || || | | | ||||| || | | Sbjct 41677 CACAAACCTAGTATTATGGCACATAGAGTTAAGGTTTTGAAAGGAGAAAAAACATTAAGA 41618 Query 74025 TTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGGAGATGAAATGAATGCT 74084 || || ||| |||| |||||||||| ||||||||||| ||||||||||||||| Sbjct 41617 TTACATTATGCTAATTGTAAAGCATATAATGCTGATTTTGATGGTGATGAAATGAATGCT 41558 Query 74085 CATGCGCCTCAA 74096 ||| |||||| Sbjct 41557 CATTTACCTCAA 41546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679611093006000