Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq355 87.8 2e-12
>seq355
Length=435918
Score = 87.8 bits (96), Expect = 2e-12
Identities = 135/192 (70%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 73908 ATTGTTCATAGATATCTTCAAAATGGAGATATACTAGTGCTAAATAGACAACCTACTTTA 73967
|||||||| ||| || || |||| ||||| | | | ||| |||| || |||||
Sbjct 41737 ATTGTTCACAGACATGTTATTGATGGGGATATGATGCTTGTTAATCGACAGCCATCTTTA 41678
Query 73968 CATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATGGATGTA---AAAACCTTTAAA 74024
|| ||| | || ||||| | | ||||||| || || | | | ||||| || | |
Sbjct 41677 CACAAACCTAGTATTATGGCACATAGAGTTAAGGTTTTGAAAGGAGAAAAAACATTAAGA 41618
Query 74025 TTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGGAGATGAAATGAATGCT 74084
|| || ||| |||| |||||||||| ||||||||||| |||||||||||||||
Sbjct 41617 TTACATTATGCTAATTGTAAAGCATATAATGCTGATTTTGATGGTGATGAAATGAATGCT 41558
Query 74085 CATGCGCCTCAA 74096
||| ||||||
Sbjct 41557 CATTTACCTCAA 41546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679611093006000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |